Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC4.36□□□□□ -1.71
KRTAP3-3Q9BYR6 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 OR7E122P-202ENST00000641144 6171 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 NCAM1-221ENST00000615112 5967 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 MIR219A1-201ENST00000362166 110 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 MIR520H-201ENST00000385126 88 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 RN7SKP167-201ENST00000411047 285 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 ATP5G1P8-201ENST00000416294 294 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 Z69666.1-201ENST00000445733 801 ntTSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 PHBP16-201ENST00000446318 950 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 RPS27P12-201ENST00000464146 258 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 AC022784.6-205ENST00000518619 807 ntTSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 IGLC5-201ENST00000519670 293 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 AL358944.1-201ENST00000528537 144 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 AP003064.2-201ENST00000528983 510 ntTSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 AC007406.2-201ENST00000540868 503 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 TRBV7-1-201ENST00000547918 380 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 AC022655.2-201ENST00000577280 318 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 AL357137.1-201ENST00000604645 203 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 AC010332.1-201ENST00000620439 97 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-3Q9BYR6 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 NLRC5-201ENST00000262510 6822 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 HMHB1-201ENST00000289448 384 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 SNORA1B-201ENST00000362535 133 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 RNA5SP69-201ENST00000364477 117 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 RPS3AP2-201ENST00000407190 754 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 RPS19P1-201ENST00000415286 434 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 AC145543.1-201ENST00000424770 586 ntTSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 AC073465.3-201ENST00000448468 405 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 AC012307.1-201ENST00000449242 197 ntTSL 3 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 AC099670.1-201ENST00000455141 783 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 AC104451.1-201ENST00000458010 176 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 RN7SL402P-201ENST00000465059 264 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 PGAM1P1-201ENST00000504014 556 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 RNU6-1291P-201ENST00000516591 104 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 RNU4-60P-201ENST00000517239 135 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 AP001189.4-201ENST00000533588 452 ntTSL 3 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 MYL6-211ENST00000548580 528 ntTSL 2 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 FXYD1-206ENST00000588715 486 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 AL627309.8-201ENST00000595919 284 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 OR1X1P-201ENST00000606159 931 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms