Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TOP1P11387 AC113192.3-201ENST00000529152 742 ntBASIC3.56□□□□□ -1.84
TOP1P11387 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TOP1P11387 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TOP1P11387 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.56□□□□□ -1.84
TOP1P11387 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.56□□□□□ -1.84
TOP1P11387 H3F3AP1-201ENST00000559984 334 ntBASIC3.56□□□□□ -1.84
TOP1P11387 LINC00557-201ENST00000563184 1279 ntBASIC3.56□□□□□ -1.84
TOP1P11387 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.56□□□□□ -1.84
TOP1P11387 ATP5F1P7-201ENST00000567330 760 ntBASIC3.56□□□□□ -1.84
TOP1P11387 TMF1P1-201ENST00000576058 373 ntBASIC3.56□□□□□ -1.84
TOP1P11387 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.56□□□□□ -1.84
TOP1P11387 AP001029.3-201ENST00000588063 596 ntBASIC3.56□□□□□ -1.84
TOP1P11387 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.56□□□□□ -1.84
TOP1P11387 AL512506.1-201ENST00000613918 449 ntBASIC3.56□□□□□ -1.84
TOP1P11387 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.56□□□□□ -1.84
TOP1P11387 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.56□□□□□ -1.84
TOP1P11387 AP006248.3-201ENST00000623580 594 ntBASIC3.56□□□□□ -1.84
TOP1P11387 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TOP1P11387 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.56□□□□□ -1.84
TOP1P11387 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.56□□□□□ -1.84
TOP1P11387 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TOP1P11387 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TOP1P11387 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TOP1P11387 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TOP1P11387 AC073325.2-201ENST00000339545 159 ntBASIC3.55□□□□□ -1.84
TOP1P11387 OR5H2-201ENST00000355273 945 ntBASIC3.55□□□□□ -1.84
TOP1P11387 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TOP1P11387 RNU6-444P-201ENST00000383988 108 ntBASIC3.55□□□□□ -1.84
TOP1P11387 UBA52P6-201ENST00000399822 382 ntBASIC3.55□□□□□ -1.84
TOP1P11387 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TOP1P11387 AC096632.1-201ENST00000427395 310 ntBASIC3.55□□□□□ -1.84
TOP1P11387 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.55□□□□□ -1.84
TOP1P11387 RAB11AP1-201ENST00000442978 646 ntBASIC3.55□□□□□ -1.84
TOP1P11387 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.55□□□□□ -1.84
TOP1P11387 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.55□□□□□ -1.84
TOP1P11387 UQCRHP3-201ENST00000451503 251 ntBASIC3.55□□□□□ -1.84
TOP1P11387 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.55□□□□□ -1.84
TOP1P11387 MTND2P6-201ENST00000455337 1030 ntBASIC3.55□□□□□ -1.84
TOP1P11387 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.55□□□□□ -1.84
TOP1P11387 AC010301.1-201ENST00000473936 355 ntBASIC3.55□□□□□ -1.84
TOP1P11387 RPS27P23-201ENST00000487608 251 ntBASIC3.55□□□□□ -1.84
TOP1P11387 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.55□□□□□ -1.84
TOP1P11387 OR2A20P-203ENST00000498397 1268 ntBASIC3.55□□□□□ -1.84
TOP1P11387 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TOP1P11387 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.55□□□□□ -1.84
TOP1P11387 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TOP1P11387 AC004062.1-201ENST00000509926 645 ntBASIC3.55□□□□□ -1.84
TOP1P11387 MTCYBP37-201ENST00000510642 1133 ntBASIC3.55□□□□□ -1.84
TOP1P11387 RN7SKP272-201ENST00000516988 232 ntBASIC3.55□□□□□ -1.84
TOP1P11387 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.55□□□□□ -1.84
TOP1P11387 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.55□□□□□ -1.84
TOP1P11387 HIGD1AP6-201ENST00000521833 279 ntBASIC3.55□□□□□ -1.84
TOP1P11387 MTND1P36-201ENST00000522384 936 ntBASIC3.55□□□□□ -1.84
TOP1P11387 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.55□□□□□ -1.84
TOP1P11387 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TOP1P11387 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.55□□□□□ -1.84
TOP1P11387 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.55□□□□□ -1.84
TOP1P11387 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.55□□□□□ -1.84
TOP1P11387 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.55□□□□□ -1.84
TOP1P11387 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.55□□□□□ -1.84
TOP1P11387 VN1R88P-201ENST00000596787 292 ntBASIC3.55□□□□□ -1.84
TOP1P11387 AC016877.3-201ENST00000606778 504 ntBASIC3.55□□□□□ -1.84
TOP1P11387 AC013468.1-201ENST00000608680 598 ntBASIC3.55□□□□□ -1.84
TOP1P11387 AL133445.2-201ENST00000611191 527 ntBASIC3.55□□□□□ -1.84
TOP1P11387 AC135507.2-201ENST00000612443 309 ntBASIC3.55□□□□□ -1.84
TOP1P11387 AL110115.1-201ENST00000614396 364 ntBASIC3.55□□□□□ -1.84
TOP1P11387 AL109620.1-201ENST00000618738 1197 ntBASIC3.55□□□□□ -1.84
TOP1P11387 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.55□□□□□ -1.84
TOP1P11387 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TOP1P11387 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TOP1P11387 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.54□□□□□ -1.84
TOP1P11387 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TOP1P11387 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TOP1P11387 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
TOP1P11387 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.54□□□□□ -1.84
TOP1P11387 RNU6-339P-201ENST00000384310 107 ntBASIC3.54□□□□□ -1.84
TOP1P11387 SNORA44-201ENST00000384584 132 ntBASIC3.54□□□□□ -1.84
TOP1P11387 MIR23A-201ENST00000385245 73 ntBASIC3.54□□□□□ -1.84
TOP1P11387 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.54□□□□□ -1.84
TOP1P11387 AC012498.1-201ENST00000424037 437 ntBASIC3.54□□□□□ -1.84
TOP1P11387 TRIAP1P1-201ENST00000427062 225 ntBASIC3.54□□□□□ -1.84
TOP1P11387 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.54□□□□□ -1.84
TOP1P11387 AC007000.2-201ENST00000442564 487 ntBASIC3.54□□□□□ -1.84
TOP1P11387 NANOGNBP1-201ENST00000448444 480 ntBASIC3.54□□□□□ -1.84
TOP1P11387 AC140076.1-201ENST00000449897 361 ntBASIC3.54□□□□□ -1.84
TOP1P11387 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.54□□□□□ -1.84
TOP1P11387 HMGN3P1-201ENST00000453847 193 ntBASIC3.54□□□□□ -1.84
TOP1P11387 RPS15AP1-201ENST00000457423 391 ntBASIC3.54□□□□□ -1.84
TOP1P11387 AC117440.1-201ENST00000474107 571 ntBASIC3.54□□□□□ -1.84
TOP1P11387 RN7SL283P-201ENST00000489055 303 ntBASIC3.54□□□□□ -1.84
TOP1P11387 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.54□□□□□ -1.84
TOP1P11387 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TOP1P11387 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.54□□□□□ -1.84
TOP1P11387 AC025768.1-201ENST00000510057 267 ntBASIC3.54□□□□□ -1.84
TOP1P11387 OR8K4P-201ENST00000534608 872 ntBASIC3.54□□□□□ -1.84
TOP1P11387 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TOP1P11387 AC022080.3-201ENST00000544433 482 ntBASIC3.54□□□□□ -1.84
TOP1P11387 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.54□□□□□ -1.84
TOP1P11387 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms