RNA–Protein interactions for RNA: ENST00000588063.1

AP001029.3-201, humanhuman

BASIC

Gene AP001029.3, Length 596 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001029.3-201ENST00000588063 AEBP2Q6ZN18 517 aaPredicted RBP18.07■□□□□ 0.48
AP001029.3-201ENST00000588063 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
AP001029.3-201ENST00000588063 SENP3Q9H4L4 574 aaPredicted RBP15.5■□□□□ 0.07
AP001029.3-201ENST00000588063 PHF23Q9BUL5 403 aaPredicted RBP15.45■□□□□ 0.06
AP001029.3-201ENST00000588063 PLPPR3Q6T4P5 718 aa14.39□□□□□ -0.11
AP001029.3-201ENST00000588063 FOXD1Q16676 465 aa14.29□□□□□ -0.12
AP001029.3-201ENST00000588063 ADRA2BP18089 450 aa13.65□□□□□ -0.22
AP001029.3-201ENST00000588063 PPP6R1Q9UPN7 881 aa13.65□□□□□ -0.22
AP001029.3-201ENST00000588063 PIAS4Q8N2W9 510 aaPredicted RBP13.5□□□□□ -0.25
AP001029.3-201ENST00000588063 MSH5O43196 834 aa13.34□□□□□ -0.27
AP001029.3-201ENST00000588063 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
AP001029.3-201ENST00000588063 PPP4R3CPQ6ZMV5 832 aa12.62□□□□□ -0.39
AP001029.3-201ENST00000588063 POTEDQ86YR6 584 aa12.46□□□□□ -0.41
AP001029.3-201ENST00000588063 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
AP001029.3-201ENST00000588063 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
AP001029.3-201ENST00000588063 CNKSR2Q8WXI2 1034 aa12.33□□□□□ -0.44
AP001029.3-201ENST00000588063 DMRT2Q9Y5R5 561 aa12.32□□□□□ -0.44
AP001029.3-201ENST00000588063 KCNA4P22459 653 aa12.18□□□□□ -0.46
AP001029.3-201ENST00000588063 RNF216Q9NWF9 866 aaPredicted RBP12.1□□□□□ -0.47
AP001029.3-201ENST00000588063 NPM3O75607 178 aaKnown RBP12.06□□□□□ -0.48
AP001029.3-201ENST00000588063 HOXD11P31277 338 aaPredicted RBP12.05□□□□□ -0.48
AP001029.3-201ENST00000588063 DNAJC5BQ9UF47 199 aa11.81□□□□□ -0.52
AP001029.3-201ENST00000588063 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
AP001029.3-201ENST00000588063 SLC4A1APQ9BWU0 796 aaKnown RBP11.66□□□□□ -0.54
AP001029.3-201ENST00000588063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.51□□□□□ -0.57
AP001029.3-201ENST00000588063 SLC4A2P04920 1241 aa11.37□□□□□ -0.59
AP001029.3-201ENST00000588063 RNF39Q9H2S5 420 aa11.34□□□□□ -0.59
AP001029.3-201ENST00000588063 FOXD4L1Q9NU39 408 aa11.32□□□□□ -0.6
AP001029.3-201ENST00000588063 C1QBPQ07021 282 aaKnown RBP11.28□□□□□ -0.6
AP001029.3-201ENST00000588063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.24□□□□□ -0.61
AP001029.3-201ENST00000588063 HNRNPUL2Q1KMD3 747 aaKnown RBP11.24□□□□□ -0.61
AP001029.3-201ENST00000588063 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
AP001029.3-201ENST00000588063 MYCNP04198 464 aaPredicted RBP11.22□□□□□ -0.61
AP001029.3-201ENST00000588063 APLP2Q06481 763 aa11.18□□□□□ -0.62
AP001029.3-201ENST00000588063 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
AP001029.3-201ENST00000588063 SAMD1Q6SPF0 538 aaPredicted RBP11.16□□□□□ -0.62
AP001029.3-201ENST00000588063 ZBTB22O15209 634 aa11.15□□□□□ -0.62
AP001029.3-201ENST00000588063 CACNB1Q02641 598 aaPredicted RBP11.14□□□□□ -0.63
AP001029.3-201ENST00000588063 CSRNP3Q8WYN3 585 aa11.09□□□□□ -0.63
AP001029.3-201ENST00000588063 ATXN8OSP0DMR3 200 aa10.99□□□□□ -0.65
AP001029.3-201ENST00000588063 CAPN15O75808 1086 aa10.96□□□□□ -0.65
AP001029.3-201ENST00000588063 ZNF219Q9P2Y4 722 aaPredicted RBP10.95□□□□□ -0.66
AP001029.3-201ENST00000588063 SPINK5Q9NQ38 1064 aaPredicted RBP10.91□□□□□ -0.66
AP001029.3-201ENST00000588063 TRHP20396 242 aaPredicted RBP10.87□□□□□ -0.67
AP001029.3-201ENST00000588063 ATF5Q9Y2D1 282 aaPredicted RBP10.78□□□□□ -0.68
AP001029.3-201ENST00000588063 DSG3P32926 999 aa10.76□□□□□ -0.69
AP001029.3-201ENST00000588063 ABCB7O75027 752 aa10.68□□□□□ -0.7
AP001029.3-201ENST00000588063 POLA2Q14181 598 aa10.67□□□□□ -0.7
AP001029.3-201ENST00000588063 ZBTB12Q9Y330 459 aaPredicted RBP10.62□□□□□ -0.71
AP001029.3-201ENST00000588063 FBLN2P98095 1184 aa10.51□□□□□ -0.73
AP001029.3-201ENST00000588063 RBM42Q9BTD8 480 aaKnown RBP10.38□□□□□ -0.75
AP001029.3-201ENST00000588063 MKRN4PQ13434 485 aaPredicted RBP10.33□□□□□ -0.76
AP001029.3-201ENST00000588063 OSCARQ8IYS5 282 aa10.28□□□□□ -0.76
AP001029.3-201ENST00000588063 SPDYE2BA6NHP3 402 aa10.27□□□□□ -0.77
AP001029.3-201ENST00000588063 SPDYE6P0CI01 402 aa10.27□□□□□ -0.77
AP001029.3-201ENST00000588063 SPDYE2Q495Y8 402 aa10.27□□□□□ -0.77
AP001029.3-201ENST00000588063 ZNF692Q9BU19 519 aaPredicted RBP10.2□□□□□ -0.78
AP001029.3-201ENST00000588063 AKT1S1Q96B36 256 aa10.19□□□□□ -0.78
AP001029.3-201ENST00000588063 SPDYE4A6NLX3 237 aa10.15□□□□□ -0.78
AP001029.3-201ENST00000588063 SSUH2Q9Y2M2 353 aa10.13□□□□□ -0.79
AP001029.3-201ENST00000588063 FKBP8Q14318 412 aa10.07□□□□□ -0.8
AP001029.3-201ENST00000588063 PABPN1Q86U42 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
AP001029.3-201ENST00000588063 REM2Q8IYK8 340 aaPredicted RBP10.03□□□□□ -0.8
AP001029.3-201ENST00000588063 SPDYE1Q8NFV5 336 aaPredicted RBP10□□□□□ -0.81
AP001029.3-201ENST00000588063 STAG3Q9UJ98 1225 aa9.96□□□□□ -0.82
AP001029.3-201ENST00000588063 PROM2Q8N271 834 aa9.95□□□□□ -0.82
AP001029.3-201ENST00000588063 CLEC11AQ9Y240 323 aa9.9□□□□□ -0.82
AP001029.3-201ENST00000588063 PITPNM1O00562 1244 aa9.89□□□□□ -0.83
AP001029.3-201ENST00000588063 CHRDL2Q6WN34 429 aa9.88□□□□□ -0.83
AP001029.3-201ENST00000588063 FBXO3Q9UK99 471 aa9.85□□□□□ -0.83
AP001029.3-201ENST00000588063 PRR29P0C7W0 189 aa9.84□□□□□ -0.83
AP001029.3-201ENST00000588063 FXR2P51116 673 aaKnown RBP eCLIP9.75□□□□□ -0.85
AP001029.3-201ENST00000588063 PLEKHG5O94827 1062 aa9.73□□□□□ -0.85
AP001029.3-201ENST00000588063 POTEHQ6S545 545 aa9.73□□□□□ -0.85
AP001029.3-201ENST00000588063 PIP4P2Q8N4L2 257 aa9.71□□□□□ -0.86
AP001029.3-201ENST00000588063 PRKAR2AP13861 404 aaKnown RBP9.67□□□□□ -0.86
AP001029.3-201ENST00000588063 MIER1Q8N108 512 aa9.66□□□□□ -0.86
AP001029.3-201ENST00000588063 PLCD3Q8N3E9 789 aa9.65□□□□□ -0.86
AP001029.3-201ENST00000588063 ZBTB47Q9UFB7 747 aaPredicted RBP9.63□□□□□ -0.87
AP001029.3-201ENST00000588063 VASPP50552 380 aaPredicted RBP9.62□□□□□ -0.87
AP001029.3-201ENST00000588063 CREBZFQ9NS37 354 aa9.62□□□□□ -0.87
AP001029.3-201ENST00000588063 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
AP001029.3-201ENST00000588063 NPM1P06748 294 aaKnown RBP eCLIP9.59□□□□□ -0.87
AP001029.3-201ENST00000588063 FARP1Q9Y4F1 1045 aaPredicted RBP9.57□□□□□ -0.88
AP001029.3-201ENST00000588063 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
AP001029.3-201ENST00000588063 MNX1P50219 401 aaPredicted RBP9.49□□□□□ -0.89
AP001029.3-201ENST00000588063 HAX1O00165 279 aa9.46□□□□□ -0.9
AP001029.3-201ENST00000588063 PAK3O75914 559 aaPredicted RBP9.46□□□□□ -0.9
AP001029.3-201ENST00000588063 IFNLR1Q8IU57 520 aaPredicted RBP9.43□□□□□ -0.9
AP001029.3-201ENST00000588063 C19orf67A6NJJ6 358 aa9.42□□□□□ -0.9
AP001029.3-201ENST00000588063 SPOCK2Q92563 424 aa9.42□□□□□ -0.9
AP001029.3-201ENST00000588063 CD44P16070 742 aaKnown RBP9.4□□□□□ -0.9
AP001029.3-201ENST00000588063 NUBP1P53384 320 aa9.37□□□□□ -0.91
AP001029.3-201ENST00000588063 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
AP001029.3-201ENST00000588063 CLCN6P51797 869 aa9.35□□□□□ -0.91
AP001029.3-201ENST00000588063 GSE1Q14687 1217 aa9.35□□□□□ -0.91
AP001029.3-201ENST00000588063 ZRANB1Q9UGI0 708 aa9.34□□□□□ -0.91
AP001029.3-201ENST00000588063 DCAF8Q5TAQ9 597 aa9.32□□□□□ -0.92
AP001029.3-201ENST00000588063 RASEFQ8IZ41 740 aa9.32□□□□□ -0.92
AP001029.3-201ENST00000588063 TSPYL2Q9H2G4 693 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms