RNA–Protein interactions for RNA: ENST00000491519.4

SATB1-216, Transcript of SATB homeobox 1, humanhuman

TSL 2 BASIC

Gene SATB1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-216ENST00000491519 AEBP2Q6ZN18 517 aaPredicted RBP28.81■■■□□ 2.2
SATB1-216ENST00000491519 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
SATB1-216ENST00000491519 SENP3Q9H4L4 574 aaPredicted RBP24.44■■□□□ 1.5
SATB1-216ENST00000491519 PHF23Q9BUL5 403 aaPredicted RBP24.15■■□□□ 1.46
SATB1-216ENST00000491519 FOXD1Q16676 465 aa22.89■■□□□ 1.25
SATB1-216ENST00000491519 PLPPR3Q6T4P5 718 aa21.5■■□□□ 1.03
SATB1-216ENST00000491519 MSH5O43196 834 aa21.38■■□□□ 1.01
SATB1-216ENST00000491519 PPP6R1Q9UPN7 881 aa21.32■■□□□ 1
SATB1-216ENST00000491519 POTEDQ86YR6 584 aa21.27■■□□□ 1
SATB1-216ENST00000491519 PIAS4Q8N2W9 510 aaPredicted RBP21.26■□□□□ 0.99
SATB1-216ENST00000491519 ADRA2BP18089 450 aa21.17■□□□□ 0.98
SATB1-216ENST00000491519 MAPK8IP2Q13387 824 aaPredicted RBP19.52■□□□□ 0.72
SATB1-216ENST00000491519 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
SATB1-216ENST00000491519 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
SATB1-216ENST00000491519 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
SATB1-216ENST00000491519 HOXD11P31277 338 aaPredicted RBP18.66■□□□□ 0.58
SATB1-216ENST00000491519 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
SATB1-216ENST00000491519 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
SATB1-216ENST00000491519 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
SATB1-216ENST00000491519 RNF216Q9NWF9 866 aaPredicted RBP18.42■□□□□ 0.54
SATB1-216ENST00000491519 RNF39Q9H2S5 420 aa18.32■□□□□ 0.52
SATB1-216ENST00000491519 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
SATB1-216ENST00000491519 C1QBPQ07021 282 aaKnown RBP17.97■□□□□ 0.47
SATB1-216ENST00000491519 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
SATB1-216ENST00000491519 NPM3O75607 178 aaKnown RBP17.85■□□□□ 0.45
SATB1-216ENST00000491519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.62■□□□□ 0.41
SATB1-216ENST00000491519 U3KPZ7 1027 aaPredicted RBP17.39■□□□□ 0.37
SATB1-216ENST00000491519 KCNA4P22459 653 aa17.36■□□□□ 0.37
SATB1-216ENST00000491519 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
SATB1-216ENST00000491519 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
SATB1-216ENST00000491519 DSG3P32926 999 aa17.09■□□□□ 0.33
SATB1-216ENST00000491519 CAPN15O75808 1086 aa17.02■□□□□ 0.32
SATB1-216ENST00000491519 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
SATB1-216ENST00000491519 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
SATB1-216ENST00000491519 ABCB7O75027 752 aa16.67■□□□□ 0.26
SATB1-216ENST00000491519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
SATB1-216ENST00000491519 APLP2Q06481 763 aa16.66■□□□□ 0.26
SATB1-216ENST00000491519 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
SATB1-216ENST00000491519 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
SATB1-216ENST00000491519 POTEHQ6S545 545 aa16.59■□□□□ 0.25
SATB1-216ENST00000491519 MYCNP04198 464 aaPredicted RBP16.45■□□□□ 0.22
SATB1-216ENST00000491519 POLA2Q14181 598 aa16.26■□□□□ 0.19
SATB1-216ENST00000491519 SLC4A1APQ9BWU0 796 aaKnown RBP16.26■□□□□ 0.19
SATB1-216ENST00000491519 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
SATB1-216ENST00000491519 ATF5Q9Y2D1 282 aaPredicted RBP16.2■□□□□ 0.18
SATB1-216ENST00000491519 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
SATB1-216ENST00000491519 ZBTB22O15209 634 aa16.04■□□□□ 0.16
SATB1-216ENST00000491519 CHRDL2Q6WN34 429 aa15.97■□□□□ 0.15
SATB1-216ENST00000491519 ZBTB12Q9Y330 459 aaPredicted RBP15.86■□□□□ 0.13
SATB1-216ENST00000491519 AKT1S1Q96B36 256 aa15.83■□□□□ 0.12
SATB1-216ENST00000491519 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
SATB1-216ENST00000491519 ATXN8OSP0DMR3 200 aa15.71■□□□□ 0.11
SATB1-216ENST00000491519 REM2Q8IYK8 340 aaPredicted RBP15.71■□□□□ 0.11
SATB1-216ENST00000491519 PIP4P2Q8N4L2 257 aa15.59■□□□□ 0.09
SATB1-216ENST00000491519 PITPNM1O00562 1244 aa15.57■□□□□ 0.08
SATB1-216ENST00000491519 FXR2P51116 673 aaKnown RBP eCLIP15.49■□□□□ 0.07
SATB1-216ENST00000491519 SP7Q8TDD2 431 aaPredicted RBP15.47■□□□□ 0.07
SATB1-216ENST00000491519 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
SATB1-216ENST00000491519 SPDYE2BA6NHP3 402 aa15.42■□□□□ 0.06
SATB1-216ENST00000491519 SPDYE6P0CI01 402 aa15.42■□□□□ 0.06
SATB1-216ENST00000491519 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
SATB1-216ENST00000491519 FBLN2P98095 1184 aa15.38■□□□□ 0.05
SATB1-216ENST00000491519 SSUH2Q9Y2M2 353 aa15.28■□□□□ 0.04
SATB1-216ENST00000491519 HAX1O00165 279 aa15.24■□□□□ 0.03
SATB1-216ENST00000491519 EVX2Q03828 476 aa15.22■□□□□ 0.03
SATB1-216ENST00000491519 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
SATB1-216ENST00000491519 SPDYE1Q8NFV5 336 aaPredicted RBP15.16■□□□□ 0.02
SATB1-216ENST00000491519 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
SATB1-216ENST00000491519 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
SATB1-216ENST00000491519 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
SATB1-216ENST00000491519 C19orf67A6NJJ6 358 aa14.99□□□□□ -0.01
SATB1-216ENST00000491519 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
SATB1-216ENST00000491519 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
SATB1-216ENST00000491519 PRR29P0C7W0 189 aa14.84□□□□□ -0.03
SATB1-216ENST00000491519 GABBR2O75899 941 aa14.79□□□□□ -0.04
SATB1-216ENST00000491519 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
SATB1-216ENST00000491519 FARP1Q9Y4F1 1045 aaPredicted RBP14.68□□□□□ -0.06
SATB1-216ENST00000491519 CD44P16070 742 aaKnown RBP14.61□□□□□ -0.07
SATB1-216ENST00000491519 POTEIP0CG38 1075 aa14.57□□□□□ -0.08
SATB1-216ENST00000491519 CREBZFQ9NS37 354 aa14.55□□□□□ -0.08
SATB1-216ENST00000491519 SPDYE4A6NLX3 237 aa14.5□□□□□ -0.09
SATB1-216ENST00000491519 LHX8Q68G74 356 aa14.48□□□□□ -0.09
SATB1-216ENST00000491519 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
SATB1-216ENST00000491519 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
SATB1-216ENST00000491519 CLCN6P51797 869 aa14.4□□□□□ -0.1
SATB1-216ENST00000491519 MNX1P50219 401 aaPredicted RBP14.36□□□□□ -0.11
SATB1-216ENST00000491519 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
SATB1-216ENST00000491519 GALR2O43603 387 aaPredicted RBP14.29□□□□□ -0.12
SATB1-216ENST00000491519 PROM2Q8N271 834 aa14.28□□□□□ -0.12
SATB1-216ENST00000491519 DCBLD2Q96PD2 775 aa14.23□□□□□ -0.13
SATB1-216ENST00000491519 PHF12Q96QT6 1004 aa14.21□□□□□ -0.13
SATB1-216ENST00000491519 NPM1P06748 294 aaKnown RBP eCLIP14.12□□□□□ -0.15
SATB1-216ENST00000491519 PAK3O75914 559 aaPredicted RBP14.11□□□□□ -0.15
SATB1-216ENST00000491519 POTEB2H3BUK9 544 aa14.08□□□□□ -0.16
SATB1-216ENST00000491519 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
SATB1-216ENST00000491519 MS4A3Q96HJ5 214 aa14.03□□□□□ -0.16
SATB1-216ENST00000491519 OTUD5Q96G74 571 aa14.01□□□□□ -0.17
SATB1-216ENST00000491519 ASTLQ6HA08 431 aaPredicted RBP13.98□□□□□ -0.17
SATB1-216ENST00000491519 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
SATB1-216ENST00000491519 ATMINO43313 823 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms