RNA–Protein interactions for RNA: ENST00000526305.1

AP001646.3-201, humanhuman

TSL 2 BASIC

Gene AP001646.3, Length 446 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001646.3-201ENST00000526305 AEBP2Q6ZN18 517 aaPredicted RBP31.37■■■□□ 2.61
AP001646.3-201ENST00000526305 CHIC1Q5VXU3 224 aa29.86■■■□□ 2.37
AP001646.3-201ENST00000526305 SENP3Q9H4L4 574 aaPredicted RBP26.62■■□□□ 1.85
AP001646.3-201ENST00000526305 PHF23Q9BUL5 403 aaPredicted RBP26.36■■□□□ 1.81
AP001646.3-201ENST00000526305 FOXD1Q16676 465 aa24.87■■□□□ 1.57
AP001646.3-201ENST00000526305 PLPPR3Q6T4P5 718 aa23.88■■□□□ 1.41
AP001646.3-201ENST00000526305 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
AP001646.3-201ENST00000526305 ADRA2BP18089 450 aa23.32■■□□□ 1.32
AP001646.3-201ENST00000526305 PIAS4Q8N2W9 510 aaPredicted RBP23.23■■□□□ 1.31
AP001646.3-201ENST00000526305 MSH5O43196 834 aa23.13■■□□□ 1.29
AP001646.3-201ENST00000526305 POTEDQ86YR6 584 aa22.41■■□□□ 1.18
AP001646.3-201ENST00000526305 MAPK8IP2Q13387 824 aaPredicted RBP21.4■■□□□ 1.02
AP001646.3-201ENST00000526305 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
AP001646.3-201ENST00000526305 DMRT2Q9Y5R5 561 aa21.17■□□□□ 0.98
AP001646.3-201ENST00000526305 PPP4R3CPQ6ZMV5 832 aa20.99■□□□□ 0.95
AP001646.3-201ENST00000526305 CNKSR2Q8WXI2 1034 aa20.53■□□□□ 0.88
AP001646.3-201ENST00000526305 HOXD11P31277 338 aaPredicted RBP20.45■□□□□ 0.86
AP001646.3-201ENST00000526305 RNF216Q9NWF9 866 aaPredicted RBP20.32■□□□□ 0.84
AP001646.3-201ENST00000526305 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
AP001646.3-201ENST00000526305 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
AP001646.3-201ENST00000526305 NPM3O75607 178 aaKnown RBP19.95■□□□□ 0.78
AP001646.3-201ENST00000526305 RNF39Q9H2S5 420 aa19.8■□□□□ 0.76
AP001646.3-201ENST00000526305 CACNB1Q02641 598 aaPredicted RBP19.78■□□□□ 0.76
AP001646.3-201ENST00000526305 KCNA4P22459 653 aa19.72■□□□□ 0.75
AP001646.3-201ENST00000526305 DNAJC5BQ9UF47 199 aa19.67■□□□□ 0.74
AP001646.3-201ENST00000526305 C1QBPQ07021 282 aaKnown RBP19.48■□□□□ 0.71
AP001646.3-201ENST00000526305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.45■□□□□ 0.7
AP001646.3-201ENST00000526305 U3KPZ7 1027 aaPredicted RBP19.11■□□□□ 0.65
AP001646.3-201ENST00000526305 SLC4A2P04920 1241 aa19.05■□□□□ 0.64
AP001646.3-201ENST00000526305 SPINK5Q9NQ38 1064 aaPredicted RBP18.81■□□□□ 0.6
AP001646.3-201ENST00000526305 CAPN15O75808 1086 aa18.7■□□□□ 0.58
AP001646.3-201ENST00000526305 DSG3P32926 999 aa18.61■□□□□ 0.57
AP001646.3-201ENST00000526305 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
AP001646.3-201ENST00000526305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
AP001646.3-201ENST00000526305 HNRNPUL2Q1KMD3 747 aaKnown RBP18.51■□□□□ 0.55
AP001646.3-201ENST00000526305 TRHP20396 242 aaPredicted RBP18.46■□□□□ 0.55
AP001646.3-201ENST00000526305 APLP2Q06481 763 aa18.44■□□□□ 0.54
AP001646.3-201ENST00000526305 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
AP001646.3-201ENST00000526305 MYCNP04198 464 aaPredicted RBP18.39■□□□□ 0.53
AP001646.3-201ENST00000526305 ZNF219Q9P2Y4 722 aaPredicted RBP18.38■□□□□ 0.53
AP001646.3-201ENST00000526305 ABCB7O75027 752 aa18.32■□□□□ 0.52
AP001646.3-201ENST00000526305 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
AP001646.3-201ENST00000526305 ZBTB22O15209 634 aa18.17■□□□□ 0.5
AP001646.3-201ENST00000526305 ATF5Q9Y2D1 282 aaPredicted RBP18.07■□□□□ 0.48
AP001646.3-201ENST00000526305 POLA2Q14181 598 aa18.02■□□□□ 0.48
AP001646.3-201ENST00000526305 ATXN8OSP0DMR3 200 aa17.7■□□□□ 0.42
AP001646.3-201ENST00000526305 RBM42Q9BTD8 480 aaKnown RBP17.65■□□□□ 0.42
AP001646.3-201ENST00000526305 POTEHQ6S545 545 aa17.57■□□□□ 0.4
AP001646.3-201ENST00000526305 ZBTB12Q9Y330 459 aaPredicted RBP17.56■□□□□ 0.4
AP001646.3-201ENST00000526305 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
AP001646.3-201ENST00000526305 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
AP001646.3-201ENST00000526305 AKT1S1Q96B36 256 aa17.32■□□□□ 0.36
AP001646.3-201ENST00000526305 CHRDL2Q6WN34 429 aa17.27■□□□□ 0.36
AP001646.3-201ENST00000526305 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
AP001646.3-201ENST00000526305 MKRN4PQ13434 485 aaPredicted RBP17.23■□□□□ 0.35
AP001646.3-201ENST00000526305 FBLN2P98095 1184 aa17.22■□□□□ 0.35
AP001646.3-201ENST00000526305 REM2Q8IYK8 340 aaPredicted RBP17.2■□□□□ 0.34
AP001646.3-201ENST00000526305 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
AP001646.3-201ENST00000526305 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
AP001646.3-201ENST00000526305 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
AP001646.3-201ENST00000526305 PITPNM1O00562 1244 aa17.02■□□□□ 0.32
AP001646.3-201ENST00000526305 PIP4P2Q8N4L2 257 aa16.92■□□□□ 0.3
AP001646.3-201ENST00000526305 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
AP001646.3-201ENST00000526305 SSUH2Q9Y2M2 353 aa16.91■□□□□ 0.3
AP001646.3-201ENST00000526305 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
AP001646.3-201ENST00000526305 SPDYE1Q8NFV5 336 aaPredicted RBP16.73■□□□□ 0.27
AP001646.3-201ENST00000526305 CLEC11AQ9Y240 323 aa16.73■□□□□ 0.27
AP001646.3-201ENST00000526305 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
AP001646.3-201ENST00000526305 PRKAR2AP13861 404 aaKnown RBP16.56■□□□□ 0.24
AP001646.3-201ENST00000526305 HAX1O00165 279 aa16.54■□□□□ 0.24
AP001646.3-201ENST00000526305 SP7Q8TDD2 431 aaPredicted RBP16.52■□□□□ 0.24
AP001646.3-201ENST00000526305 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
AP001646.3-201ENST00000526305 EVX2Q03828 476 aa16.45■□□□□ 0.22
AP001646.3-201ENST00000526305 CHADLQ6NUI6 762 aa16.44■□□□□ 0.22
AP001646.3-201ENST00000526305 SPDYE4A6NLX3 237 aa16.42■□□□□ 0.22
AP001646.3-201ENST00000526305 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
AP001646.3-201ENST00000526305 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
AP001646.3-201ENST00000526305 FARP1Q9Y4F1 1045 aaPredicted RBP16.19■□□□□ 0.18
AP001646.3-201ENST00000526305 CREBZFQ9NS37 354 aa16.14■□□□□ 0.17
AP001646.3-201ENST00000526305 PROM2Q8N271 834 aa16.08■□□□□ 0.16
AP001646.3-201ENST00000526305 CD44P16070 742 aaKnown RBP16.03■□□□□ 0.16
AP001646.3-201ENST00000526305 GABBR2O75899 941 aa16.02■□□□□ 0.16
AP001646.3-201ENST00000526305 MNX1P50219 401 aaPredicted RBP15.9■□□□□ 0.14
AP001646.3-201ENST00000526305 ZRANB1Q9UGI0 708 aa15.84■□□□□ 0.13
AP001646.3-201ENST00000526305 ZNF579Q8NAF0 562 aaKnown RBP15.79■□□□□ 0.12
AP001646.3-201ENST00000526305 FKBP8Q14318 412 aa15.77■□□□□ 0.12
AP001646.3-201ENST00000526305 NPM1P06748 294 aaKnown RBP eCLIP15.76■□□□□ 0.11
AP001646.3-201ENST00000526305 POTEIP0CG38 1075 aa15.73■□□□□ 0.11
AP001646.3-201ENST00000526305 CLCN6P51797 869 aa15.72■□□□□ 0.11
AP001646.3-201ENST00000526305 PAK3O75914 559 aaPredicted RBP15.66■□□□□ 0.1
AP001646.3-201ENST00000526305 PHF12Q96QT6 1004 aa15.66■□□□□ 0.1
AP001646.3-201ENST00000526305 GALR2O43603 387 aaPredicted RBP15.64■□□□□ 0.09
AP001646.3-201ENST00000526305 MIER1Q8N108 512 aa15.64■□□□□ 0.09
AP001646.3-201ENST00000526305 DCBLD2Q96PD2 775 aa15.57■□□□□ 0.08
AP001646.3-201ENST00000526305 TSPYL2Q9H2G4 693 aaPredicted RBP15.55■□□□□ 0.08
AP001646.3-201ENST00000526305 PLEKHG5O94827 1062 aa15.53■□□□□ 0.08
AP001646.3-201ENST00000526305 LHX8Q68G74 356 aa15.51■□□□□ 0.07
AP001646.3-201ENST00000526305 PLCD3Q8N3E9 789 aa15.51■□□□□ 0.07
AP001646.3-201ENST00000526305 CCDC61Q9Y6R9 512 aa15.48■□□□□ 0.07
AP001646.3-201ENST00000526305 RASEFQ8IZ41 740 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms