Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AP001541.1-201ENST00000623322 1904 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AL355834.1-201ENST00000556602 3965 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 RNA5SP350-201ENST00000363298 111 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 RNU1-49P-201ENST00000363468 159 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 RN7SKP162-201ENST00000363605 345 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 RNA5SP478-201ENST00000364657 115 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 RN7SKP78-201ENST00000364711 318 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 SNORA43.1-201ENST00000364863 140 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 RNU6-790P-201ENST00000384479 105 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 RNA5SP178-201ENST00000410380 128 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 MTCO3P19-201ENST00000415864 321 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 BX276092.3-201ENST00000424182 230 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC104332.1-201ENST00000440471 797 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC097463.1-201ENST00000447288 481 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AL162389.1-201ENST00000449233 177 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC068228.1-201ENST00000461723 211 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC010631.1-201ENST00000474150 156 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC087385.1-201ENST00000475062 312 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 LSM3P4-201ENST00000502948 309 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 RNU6-570P-201ENST00000517051 105 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 RN7SKP92-201ENST00000517266 244 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 IGKV3D-34-201ENST00000522638 302 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC009643.1-201ENST00000532030 391 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AL049839.1-201ENST00000556151 657 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC008507.3-201ENST00000585753 472 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC092266.1-201ENST00000610958 165 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC024884.1-201ENST00000620583 399 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 AC004656.1-201ENST00000568479 4951 ntBASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HRH3Q9Y5N1 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AL606537.1-201ENST00000607258 2011 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 Y_RNA.29-201ENST00000362570 113 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RNU6-212P-201ENST00000362642 104 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 Y_RNA.180-201ENST00000363867 113 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RNU6-596P-201ENST00000365395 98 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RNU6-1329P-201ENST00000365664 107 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RNU6-45P-201ENST00000384471 107 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RNU2-71P-201ENST00000411395 189 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RPS23P10-201ENST00000416185 486 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 CEACAMP1-201ENST00000434624 1035 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 CYCSP12-201ENST00000437729 300 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 OR2AQ1P-201ENST00000451972 200 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 PPIAP27-201ENST00000453800 265 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 PPIAP7-201ENST00000454070 489 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 RANP2-201ENST00000456833 229 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 ACA59.1-201ENST00000515966 143 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AP000620.1-201ENST00000527147 504 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 OR10G5P-201ENST00000532733 358 ntBASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HRH3Q9Y5N1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms