Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 OR9N1P-201ENST00000491296 333 ntBASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 AC100870.1-201ENST00000522035 505 ntBASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 AK6P1-201ENST00000540219 478 ntBASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 AC092881.1-201ENST00000638218 2733 ntBASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 SNORD114-1-201ENST00000362705 72 ntBASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 RNU6-984P-201ENST00000363236 109 ntBASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 RPL31P45-201ENST00000419532 356 ntBASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 AC091179.1-201ENST00000461606 579 ntBASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.59□□□□□ -2.16
VPS13DQ5THJ4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 NDUFB4P9-201ENST00000511646 388 ntBASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 AL136964.1-201ENST00000622038 2990 ntBASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 RN7SKP44-201ENST00000363602 316 ntBASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 AC093908.1-201ENST00000623125 8092 ntBASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 AC097714.1-201ENST00000511272 1647 ntBASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 RNU6-253P-201ENST00000384730 105 ntBASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 EI24P2-201ENST00000397776 1076 ntBASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 AC018630.1-201ENST00000541376 925 ntBASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 AC068313.1-201ENST00000604028 1008 ntBASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS13DQ5THJ4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 SUMO2P4-201ENST00000504193 276 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 SNRPGP18-201ENST00000553000 214 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AL845331.3-202ENST00000562856 261 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AC107871.2-201ENST00000612894 502 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 MIR6873-201ENST00000622788 63 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 GABPAP-201ENST00000419271 1356 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AC004925.1-201ENST00000624256 2706 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 RNU6-661P-201ENST00000362409 107 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 RNU1-100P-201ENST00000365255 165 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 GSTA9P-201ENST00000406231 611 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AL139156.1-201ENST00000412785 841 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 OR4K7P-201ENST00000580232 945 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AP001005.3-201ENST00000622049 129 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AL512643.1-201ENST00000635735 524 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 MTND5P29-201ENST00000458676 1807 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 SDCBPP3-201ENST00000419629 891 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 RPL23AP11-201ENST00000475260 469 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 MTCYBP20-201ENST00000524239 1129 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AC011611.5-201ENST00000552477 578 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AL451074.6-201ENST00000608512 729 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AC009570.1-201ENST00000609599 745 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 OR10AB1P-202ENST00000641219 1686 ntBASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS13DQ5THJ4 AL512646.1-201ENST00000269395 1077 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 SNORA25.6-201ENST00000364121 118 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms