Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.04□□□□□ -1.92
DFFAO00273 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
DFFAO00273 AL359893.1-201ENST00000447628 1580 ntBASIC3.04□□□□□ -1.92
DFFAO00273 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
DFFAO00273 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
DFFAO00273 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
DFFAO00273 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.03□□□□□ -1.92
DFFAO00273 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
DFFAO00273 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
DFFAO00273 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
DFFAO00273 UBE2V1P11-201ENST00000411559 285 ntBASIC3.03□□□□□ -1.92
DFFAO00273 TATDN1P1-201ENST00000414123 891 ntBASIC3.03□□□□□ -1.92
DFFAO00273 RPL7P46-201ENST00000425129 740 ntBASIC3.03□□□□□ -1.92
DFFAO00273 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.03□□□□□ -1.92
DFFAO00273 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.03□□□□□ -1.92
DFFAO00273 HIGD1AP11-201ENST00000438361 280 ntBASIC3.03□□□□□ -1.92
DFFAO00273 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.03□□□□□ -1.92
DFFAO00273 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.03□□□□□ -1.92
DFFAO00273 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.03□□□□□ -1.92
DFFAO00273 AC089999.1-201ENST00000460336 374 ntBASIC3.03□□□□□ -1.92
DFFAO00273 AC015724.1-201ENST00000478577 156 ntBASIC3.03□□□□□ -1.92
DFFAO00273 RPS29P2-201ENST00000479278 136 ntBASIC3.03□□□□□ -1.92
DFFAO00273 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.03□□□□□ -1.92
DFFAO00273 RN7SKP43-201ENST00000516173 320 ntBASIC3.03□□□□□ -1.92
DFFAO00273 SNORA48.9-201ENST00000516419 162 ntBASIC3.03□□□□□ -1.92
DFFAO00273 OR5G4P-201ENST00000525251 760 ntBASIC3.03□□□□□ -1.92
DFFAO00273 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.03□□□□□ -1.92
DFFAO00273 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.03□□□□□ -1.92
DFFAO00273 H3F3AP1-201ENST00000559984 334 ntBASIC3.03□□□□□ -1.92
DFFAO00273 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.03□□□□□ -1.92
DFFAO00273 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.03□□□□□ -1.92
DFFAO00273 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.03□□□□□ -1.92
DFFAO00273 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.03□□□□□ -1.92
DFFAO00273 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.03□□□□□ -1.92
DFFAO00273 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.03□□□□□ -1.92
DFFAO00273 AC015871.2-201ENST00000603605 948 ntBASIC3.03□□□□□ -1.92
DFFAO00273 IGHV3-29-201ENST00000604817 344 ntBASIC3.03□□□□□ -1.92
DFFAO00273 AL009028.1-201ENST00000604895 802 ntBASIC3.03□□□□□ -1.92
DFFAO00273 AC016877.3-201ENST00000606778 504 ntBASIC3.03□□□□□ -1.92
DFFAO00273 FRG1HP-204ENST00000617940 757 ntBASIC3.03□□□□□ -1.92
DFFAO00273 AP003400.6-201ENST00000624698 740 ntBASIC3.03□□□□□ -1.92
DFFAO00273 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.03□□□□□ -1.92
DFFAO00273 FRG1DP-201ENST00000635586 771 ntBASIC3.03□□□□□ -1.92
DFFAO00273 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
DFFAO00273 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
DFFAO00273 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
DFFAO00273 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
DFFAO00273 SEC63P2-201ENST00000503863 1939 ntBASIC3.03□□□□□ -1.92
DFFAO00273 AC093831.2-201ENST00000624393 3427 ntBASIC3.03□□□□□ -1.92
DFFAO00273 MTND5P11-201ENST00000511037 1812 ntBASIC3.03□□□□□ -1.93
DFFAO00273 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
DFFAO00273 AC000403.1-201ENST00000613696 3585 ntBASIC3.02□□□□□ -1.93
DFFAO00273 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DFFAO00273 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DFFAO00273 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.02□□□□□ -1.93
DFFAO00273 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
DFFAO00273 RNU6-1339P-201ENST00000363574 91 ntBASIC3.02□□□□□ -1.93
DFFAO00273 RNU6-761P-201ENST00000384148 107 ntBASIC3.02□□□□□ -1.93
DFFAO00273 RNU6-883P-201ENST00000384597 107 ntBASIC3.02□□□□□ -1.93
DFFAO00273 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DFFAO00273 SNORA11.1-201ENST00000408133 129 ntBASIC3.02□□□□□ -1.93
DFFAO00273 AC073264.1-201ENST00000411508 416 ntBASIC3.02□□□□□ -1.93
DFFAO00273 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.02□□□□□ -1.93
DFFAO00273 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DFFAO00273 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.02□□□□□ -1.93
DFFAO00273 AL513321.1-201ENST00000441175 761 ntBASIC3.02□□□□□ -1.93
DFFAO00273 RPS26P56-201ENST00000444468 240 ntBASIC3.02□□□□□ -1.93
DFFAO00273 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.02□□□□□ -1.93
DFFAO00273 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.02□□□□□ -1.93
DFFAO00273 AC112492.1-201ENST00000449607 712 ntBASIC3.02□□□□□ -1.93
DFFAO00273 NF1P3-201ENST00000457709 450 ntBASIC3.02□□□□□ -1.93
DFFAO00273 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.02□□□□□ -1.93
DFFAO00273 RPL5P24-201ENST00000463742 885 ntBASIC3.02□□□□□ -1.93
DFFAO00273 AC087879.1-201ENST00000474343 374 ntBASIC3.02□□□□□ -1.93
DFFAO00273 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DFFAO00273 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.02□□□□□ -1.93
DFFAO00273 MTND4LP22-201ENST00000508209 276 ntBASIC3.02□□□□□ -1.93
DFFAO00273 POU5F1P7-201ENST00000508759 541 ntBASIC3.02□□□□□ -1.93
DFFAO00273 SCGB1D5P-201ENST00000515134 247 ntBASIC3.02□□□□□ -1.93
DFFAO00273 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.02□□□□□ -1.93
DFFAO00273 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.02□□□□□ -1.93
DFFAO00273 AC022080.3-201ENST00000544433 482 ntBASIC3.02□□□□□ -1.93
DFFAO00273 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
DFFAO00273 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.02□□□□□ -1.93
DFFAO00273 MIR4325-201ENST00000583049 90 ntBASIC3.02□□□□□ -1.93
DFFAO00273 AC017100.2-201ENST00000584628 355 ntBASIC3.02□□□□□ -1.93
DFFAO00273 OR4G1P-201ENST00000588632 938 ntBASIC3.02□□□□□ -1.93
DFFAO00273 MIR1264-201ENST00000616374 69 ntBASIC3.02□□□□□ -1.93
DFFAO00273 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.02□□□□□ -1.93
DFFAO00273 AL109659.3-201ENST00000624985 950 ntBASIC3.02□□□□□ -1.93
DFFAO00273 AL356118.1-201ENST00000635272 1078 ntBASIC3.02□□□□□ -1.93
DFFAO00273 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.02□□□□□ -1.93
DFFAO00273 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DFFAO00273 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.02□□□□□ -1.93
DFFAO00273 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.01□□□□□ -1.93
DFFAO00273 AL136164.4-201ENST00000625013 2135 ntBASIC3.01□□□□□ -1.93
DFFAO00273 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
DFFAO00273 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
DFFAO00273 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
DFFAO00273 U3.42-201ENST00000408746 214 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms