RNA–Protein interactions for RNA: ENST00000580323.1

LINC01899-201, Transcript of long intergenic non-protein coding RNA 1899, humanhuman

TSL 5 BASIC

Gene LINC01899, Length 312 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01899-201ENST00000580323 AEBP2Q6ZN18 517 aaPredicted RBP21.19■□□□□ 0.98
LINC01899-201ENST00000580323 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
LINC01899-201ENST00000580323 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
LINC01899-201ENST00000580323 SENP3Q9H4L4 574 aaPredicted RBP17.95■□□□□ 0.46
LINC01899-201ENST00000580323 FOXD1Q16676 465 aa16.71■□□□□ 0.27
LINC01899-201ENST00000580323 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
LINC01899-201ENST00000580323 PPP6R1Q9UPN7 881 aa15.93■□□□□ 0.14
LINC01899-201ENST00000580323 ADRA2BP18089 450 aa15.87■□□□□ 0.13
LINC01899-201ENST00000580323 PIAS4Q8N2W9 510 aaPredicted RBP15.66■□□□□ 0.1
LINC01899-201ENST00000580323 MSH5O43196 834 aa15.45■□□□□ 0.06
LINC01899-201ENST00000580323 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
LINC01899-201ENST00000580323 SCAF1Q9H7N4 1312 aaKnown RBP14.47□□□□□ -0.09
LINC01899-201ENST00000580323 MAPK8IP2Q13387 824 aaPredicted RBP14.46□□□□□ -0.09
LINC01899-201ENST00000580323 POTEDQ86YR6 584 aa14.44□□□□□ -0.1
LINC01899-201ENST00000580323 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
LINC01899-201ENST00000580323 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
LINC01899-201ENST00000580323 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
LINC01899-201ENST00000580323 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
LINC01899-201ENST00000580323 KCNA4P22459 653 aa13.97□□□□□ -0.17
LINC01899-201ENST00000580323 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
LINC01899-201ENST00000580323 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
LINC01899-201ENST00000580323 DNAJC5BQ9UF47 199 aa13.62□□□□□ -0.23
LINC01899-201ENST00000580323 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
LINC01899-201ENST00000580323 RNF39Q9H2S5 420 aa13.26□□□□□ -0.29
LINC01899-201ENST00000580323 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
LINC01899-201ENST00000580323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC01899-201ENST00000580323 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
LINC01899-201ENST00000580323 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
LINC01899-201ENST00000580323 C1QBPQ07021 282 aaKnown RBP13.06□□□□□ -0.32
LINC01899-201ENST00000580323 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
LINC01899-201ENST00000580323 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
LINC01899-201ENST00000580323 ZBTB22O15209 634 aa12.9□□□□□ -0.34
LINC01899-201ENST00000580323 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
LINC01899-201ENST00000580323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
LINC01899-201ENST00000580323 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
LINC01899-201ENST00000580323 SPINK5Q9NQ38 1064 aaPredicted RBP12.73□□□□□ -0.37
LINC01899-201ENST00000580323 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
LINC01899-201ENST00000580323 APLP2Q06481 763 aa12.66□□□□□ -0.38
LINC01899-201ENST00000580323 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
LINC01899-201ENST00000580323 CAPN15O75808 1086 aa12.62□□□□□ -0.39
LINC01899-201ENST00000580323 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
LINC01899-201ENST00000580323 ZNF219Q9P2Y4 722 aaPredicted RBP12.55□□□□□ -0.4
LINC01899-201ENST00000580323 DSG3P32926 999 aa12.54□□□□□ -0.4
LINC01899-201ENST00000580323 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
LINC01899-201ENST00000580323 TRHP20396 242 aaPredicted RBP12.52□□□□□ -0.41
LINC01899-201ENST00000580323 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
LINC01899-201ENST00000580323 ABCB7O75027 752 aa12.39□□□□□ -0.43
LINC01899-201ENST00000580323 POLA2Q14181 598 aa12.29□□□□□ -0.44
LINC01899-201ENST00000580323 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
LINC01899-201ENST00000580323 MKRN4PQ13434 485 aaPredicted RBP11.99□□□□□ -0.49
LINC01899-201ENST00000580323 FBLN2P98095 1184 aa11.93□□□□□ -0.5
LINC01899-201ENST00000580323 OSCARQ8IYS5 282 aa11.92□□□□□ -0.5
LINC01899-201ENST00000580323 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
LINC01899-201ENST00000580323 SPDYE2BA6NHP3 402 aa11.77□□□□□ -0.53
LINC01899-201ENST00000580323 SPDYE6P0CI01 402 aa11.77□□□□□ -0.53
LINC01899-201ENST00000580323 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
LINC01899-201ENST00000580323 AKT1S1Q96B36 256 aa11.74□□□□□ -0.53
LINC01899-201ENST00000580323 SSUH2Q9Y2M2 353 aa11.7□□□□□ -0.54
LINC01899-201ENST00000580323 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
LINC01899-201ENST00000580323 REM2Q8IYK8 340 aaPredicted RBP11.63□□□□□ -0.55
LINC01899-201ENST00000580323 SPDYE4A6NLX3 237 aa11.55□□□□□ -0.56
LINC01899-201ENST00000580323 PITPNM1O00562 1244 aa11.51□□□□□ -0.57
LINC01899-201ENST00000580323 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
LINC01899-201ENST00000580323 PABPN1Q86U42 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC01899-201ENST00000580323 PROM2Q8N271 834 aa11.45□□□□□ -0.58
LINC01899-201ENST00000580323 SPDYE1Q8NFV5 336 aaPredicted RBP11.43□□□□□ -0.58
LINC01899-201ENST00000580323 FKBP8Q14318 412 aa11.37□□□□□ -0.59
LINC01899-201ENST00000580323 POTEHQ6S545 545 aa11.37□□□□□ -0.59
LINC01899-201ENST00000580323 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC01899-201ENST00000580323 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
LINC01899-201ENST00000580323 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
LINC01899-201ENST00000580323 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
LINC01899-201ENST00000580323 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
LINC01899-201ENST00000580323 PRKAR2AP13861 404 aaKnown RBP11.18□□□□□ -0.62
LINC01899-201ENST00000580323 CHADLQ6NUI6 762 aa11.14□□□□□ -0.63
LINC01899-201ENST00000580323 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
LINC01899-201ENST00000580323 FARP1Q9Y4F1 1045 aaPredicted RBP11.03□□□□□ -0.64
LINC01899-201ENST00000580323 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.65
LINC01899-201ENST00000580323 FBXO3Q9UK99 471 aa11□□□□□ -0.65
LINC01899-201ENST00000580323 C19orf67A6NJJ6 358 aa10.98□□□□□ -0.65
LINC01899-201ENST00000580323 HAX1O00165 279 aa10.95□□□□□ -0.66
LINC01899-201ENST00000580323 EVX2Q03828 476 aa10.93□□□□□ -0.66
LINC01899-201ENST00000580323 MIER1Q8N108 512 aa10.92□□□□□ -0.66
LINC01899-201ENST00000580323 VASPP50552 380 aaPredicted RBP10.9□□□□□ -0.66
LINC01899-201ENST00000580323 PLCD3Q8N3E9 789 aa10.88□□□□□ -0.67
LINC01899-201ENST00000580323 NPM1P06748 294 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC01899-201ENST00000580323 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
LINC01899-201ENST00000580323 CD44P16070 742 aaKnown RBP10.85□□□□□ -0.67
LINC01899-201ENST00000580323 SP7Q8TDD2 431 aaPredicted RBP10.85□□□□□ -0.67
LINC01899-201ENST00000580323 ZBTB47Q9UFB7 747 aaPredicted RBP10.79□□□□□ -0.68
LINC01899-201ENST00000580323 NUBP1P53384 320 aa10.77□□□□□ -0.69
LINC01899-201ENST00000580323 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
LINC01899-201ENST00000580323 IFNLR1Q8IU57 520 aaPredicted RBP10.75□□□□□ -0.69
LINC01899-201ENST00000580323 RASEFQ8IZ41 740 aa10.75□□□□□ -0.69
LINC01899-201ENST00000580323 ZRANB1Q9UGI0 708 aa10.75□□□□□ -0.69
LINC01899-201ENST00000580323 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
LINC01899-201ENST00000580323 GABBR2O75899 941 aa10.69□□□□□ -0.7
LINC01899-201ENST00000580323 CCDC61Q9Y6R9 512 aa10.69□□□□□ -0.7
LINC01899-201ENST00000580323 TSPYL2Q9H2G4 693 aaPredicted RBP10.67□□□□□ -0.7
LINC01899-201ENST00000580323 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 256.9 ms