Protein–RNA interactions for Protein: Q96JQ0

DCHS1, Protocadherin-16, humanhuman

Predictions only

Length 3,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1Q96JQ0 SAGE4P-201ENST00000442271 3381 ntBASIC2.4□□□□□ -2.03
DCHS1Q96JQ0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
DCHS1Q96JQ0 AL136964.1-201ENST00000622038 2990 ntBASIC2.4□□□□□ -2.03
DCHS1Q96JQ0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
DCHS1Q96JQ0 OR52B1P-201ENST00000316506 909 ntBASIC2.4□□□□□ -2.03
DCHS1Q96JQ0 AC010881.1-201ENST00000433830 235 ntBASIC2.4□□□□□ -2.03
DCHS1Q96JQ0 AC025881.1-201ENST00000518851 512 ntBASIC2.4□□□□□ -2.03
DCHS1Q96JQ0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.4□□□□□ -2.03
DCHS1Q96JQ0 AL162233.1-201ENST00000620014 944 ntBASIC2.4□□□□□ -2.03
DCHS1Q96JQ0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.4□□□□□ -2.03
DCHS1Q96JQ0 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 SNORD62.1-201ENST00000362541 86 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 RN7SKP58-201ENST00000411010 305 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC135721.1-201ENST00000497954 479 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC108078.3-201ENST00000502633 489 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 Z82217.1-201ENST00000625157 8149 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 MUC2-202ENST00000613187 4845 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 CUL1P1-201ENST00000509510 2425 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 RN7SKP32-201ENST00000410167 303 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AP1B1P2-201ENST00000416196 106 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 ST13P20-201ENST00000447996 1065 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC021733.2-201ENST00000518830 497 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC026464.5-201ENST00000562497 722 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC063952.1-203ENST00000634410 658 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC080013.2-201ENST00000460866 323 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 OR4T1P-201ENST00000554933 911 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AL355493.4-201ENST00000618530 292 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 AC006111.3-201ENST00000622137 383 ntBASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
DCHS1Q96JQ0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 NPM1P49-201ENST00000448027 714 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 AC126177.3-201ENST00000551839 688 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 MIR6873-201ENST00000622788 63 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 NR1H5P-201ENST00000452683 1377 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 RNU1-35P-201ENST00000362782 153 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 Y_RNA.295-201ENST00000364918 102 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 RNU1-89P-201ENST00000384592 164 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 RPL30P2-201ENST00000414021 291 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 RPS26P40-201ENST00000435209 294 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 RPS29P6-201ENST00000438196 145 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 AC009238.1-201ENST00000442165 424 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 AC009237.6-201ENST00000446969 424 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 AC093392.2-201ENST00000450682 337 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 RPL23AP49-201ENST00000492925 468 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 ELOCP31-201ENST00000540463 467 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 AC008507.1-201ENST00000587506 734 ntBASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
DCHS1Q96JQ0 RPS7P13-201ENST00000413955 498 ntBASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 DNAJC19P4-201ENST00000440115 345 ntBASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 VN1R80P-201ENST00000597126 338 ntBASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 AC118282.1-201ENST00000506408 765 ntBASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 ARL2BPP6-201ENST00000512757 439 ntBASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 AC135628.1-201ENST00000568867 534 ntBASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 MTND5P29-201ENST00000458676 1807 ntBASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DCHS1Q96JQ0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms