Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.85□□□□□ -1.63
HPS3Q969F9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.85□□□□□ -1.63
HPS3Q969F9 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS3Q969F9 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.85□□□□□ -1.63
HPS3Q969F9 AC100770.1-201ENST00000532310 322 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 TOMM20P2-201ENST00000540082 421 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS3Q969F9 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS3Q969F9 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HPS3Q969F9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.85□□□□□ -1.63
HPS3Q969F9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS3Q969F9 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS3Q969F9 MIR544B-201ENST00000582372 78 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 MIR4715-201ENST00000584117 79 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.85□□□□□ -1.63
HPS3Q969F9 AL451086.1-201ENST00000605596 223 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AP003117.2-201ENST00000606010 545 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AC103591.3-201ENST00000608684 209 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AP000254.1-201ENST00000609934 520 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 AC073968.1-201ENST00000618594 637 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.85□□□□□ -1.63
HPS3Q969F9 AC067931.1-201ENST00000624190 671 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.85□□□□□ -1.63
HPS3Q969F9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HPS3Q969F9 NUP58P1-201ENST00000502546 1738 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
HPS3Q969F9 AL139811.1-201ENST00000424779 2299 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HPS3Q969F9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HPS3Q969F9 AC025031.4-201ENST00000621248 3271 ntBASIC4.85□□□□□ -1.63
HPS3Q969F9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.85□□□□□ -1.63
HPS3Q969F9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS3Q969F9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HPS3Q969F9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HPS3Q969F9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS3Q969F9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HPS3Q969F9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS3Q969F9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HPS3Q969F9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HPS3Q969F9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS3Q969F9 FGF7P2-201ENST00000332473 296 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 RNA5SP22-201ENST00000365393 109 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS3Q969F9 MT-TC-201ENST00000387405 66 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 MTND4LP20-201ENST00000402379 270 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 RNA5SP146-201ENST00000410743 123 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 RPS7P13-201ENST00000413955 498 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 OFD1P18Y-201ENST00000420889 959 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS3Q969F9 PDSS1P1-201ENST00000422953 1114 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS3Q969F9 PSMA6P3-201ENST00000428242 164 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AL589823.1-201ENST00000429577 183 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AC016712.1-201ENST00000431088 378 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 RPS3AP54-201ENST00000435535 734 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS3Q969F9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS3Q969F9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS3Q969F9 CFTRP1-201ENST00000456646 183 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 OR6K1P-201ENST00000456766 971 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AC079804.1-201ENST00000461922 436 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 UBTFL6-201ENST00000477929 1024 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AC012158.1-204ENST00000483430 465 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 CBX3P3-201ENST00000508108 532 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 STMN1P2-201ENST00000508435 439 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.84□□□□□ -1.63
HPS3Q969F9 OR6C73P-201ENST00000546432 358 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS3Q969F9 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS3Q969F9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS3Q969F9 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HPS3Q969F9 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS3Q969F9 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS3Q969F9 MIR5096-201ENST00000583713 70 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS3Q969F9 AC068790.4-201ENST00000602474 263 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AC105429.2-201ENST00000610567 517 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AL121873.1-201ENST00000616013 524 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AL138721.1-201ENST00000616756 179 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.84□□□□□ -1.63
HPS3Q969F9 AP005019.3-201ENST00000620418 560 ntBASIC4.84□□□□□ -1.63
HPS3Q969F9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS3Q969F9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.84□□□□□ -1.63
HPS3Q969F9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HPS3Q969F9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HPS3Q969F9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
HPS3Q969F9 OR56B2P-202ENST00000641377 2453 ntBASIC4.84□□□□□ -1.64
HPS3Q969F9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.83□□□□□ -1.64
HPS3Q969F9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HPS3Q969F9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HPS3Q969F9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HPS3Q969F9 AL161781.1-201ENST00000354277 403 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 MIR3065-201ENST00000390137 79 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 U3.22-201ENST00000391120 215 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 SNORD66.1-201ENST00000391230 76 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 MTCO1P17-201ENST00000411522 491 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 MTCO3P41-201ENST00000414801 328 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 UBTFL3-201ENST00000418934 1024 ntBASIC4.83□□□□□ -1.64
HPS3Q969F9 AL592293.2-201ENST00000422292 996 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms