RNA–Protein interactions for RNA: ENST00000450294.3

LINC01828-202, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5 BASIC

Gene LINC01828, Length 955 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-202ENST00000450294 AEBP2Q6ZN18 517 aaPredicted RBP30.13■■■□□ 2.41
LINC01828-202ENST00000450294 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
LINC01828-202ENST00000450294 SENP3Q9H4L4 574 aaPredicted RBP26.02■■□□□ 1.76
LINC01828-202ENST00000450294 PHF23Q9BUL5 403 aaPredicted RBP25.53■■□□□ 1.68
LINC01828-202ENST00000450294 FOXD1Q16676 465 aa24.03■■□□□ 1.44
LINC01828-202ENST00000450294 PLPPR3Q6T4P5 718 aa23.22■■□□□ 1.31
LINC01828-202ENST00000450294 MSH5O43196 834 aa22.73■■□□□ 1.23
LINC01828-202ENST00000450294 PIAS4Q8N2W9 510 aaPredicted RBP22.59■■□□□ 1.21
LINC01828-202ENST00000450294 PPP6R1Q9UPN7 881 aa22.38■■□□□ 1.17
LINC01828-202ENST00000450294 ADRA2BP18089 450 aa22.37■■□□□ 1.17
LINC01828-202ENST00000450294 POTEDQ86YR6 584 aa21.86■■□□□ 1.09
LINC01828-202ENST00000450294 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
LINC01828-202ENST00000450294 DMRT2Q9Y5R5 561 aa20.56■□□□□ 0.88
LINC01828-202ENST00000450294 MAPK8IP2Q13387 824 aaPredicted RBP20.46■□□□□ 0.87
LINC01828-202ENST00000450294 PPP4R3CPQ6ZMV5 832 aa20.24■□□□□ 0.83
LINC01828-202ENST00000450294 CNKSR2Q8WXI2 1034 aa19.95■□□□□ 0.78
LINC01828-202ENST00000450294 HOXD11P31277 338 aaPredicted RBP19.82■□□□□ 0.76
LINC01828-202ENST00000450294 RNF216Q9NWF9 866 aaPredicted RBP19.74■□□□□ 0.75
LINC01828-202ENST00000450294 DCAF8L1A6NGE4 600 aa19.73■□□□□ 0.75
LINC01828-202ENST00000450294 NCBP3Q53F19 620 aaKnown RBP19.69■□□□□ 0.74
LINC01828-202ENST00000450294 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
LINC01828-202ENST00000450294 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
LINC01828-202ENST00000450294 RNF39Q9H2S5 420 aa19.25■□□□□ 0.67
LINC01828-202ENST00000450294 NPM3O75607 178 aaKnown RBP19.15■□□□□ 0.66
LINC01828-202ENST00000450294 C1QBPQ07021 282 aaKnown RBP19.1■□□□□ 0.65
LINC01828-202ENST00000450294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.95■□□□□ 0.62
LINC01828-202ENST00000450294 KCNA4P22459 653 aa18.77■□□□□ 0.6
LINC01828-202ENST00000450294 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
LINC01828-202ENST00000450294 APLP2Q06481 763 aa18.33■□□□□ 0.52
LINC01828-202ENST00000450294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
LINC01828-202ENST00000450294 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
LINC01828-202ENST00000450294 CAPN15O75808 1086 aa18.21■□□□□ 0.51
LINC01828-202ENST00000450294 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
LINC01828-202ENST00000450294 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.48
LINC01828-202ENST00000450294 SAMD1Q6SPF0 538 aaPredicted RBP18.06■□□□□ 0.48
LINC01828-202ENST00000450294 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
LINC01828-202ENST00000450294 DSG3P32926 999 aa18.01■□□□□ 0.47
LINC01828-202ENST00000450294 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
LINC01828-202ENST00000450294 MYCNP04198 464 aaPredicted RBP17.88■□□□□ 0.45
LINC01828-202ENST00000450294 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
LINC01828-202ENST00000450294 ABCB7O75027 752 aa17.68■□□□□ 0.42
LINC01828-202ENST00000450294 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
LINC01828-202ENST00000450294 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
LINC01828-202ENST00000450294 POLA2Q14181 598 aa17.41■□□□□ 0.38
LINC01828-202ENST00000450294 ZBTB12Q9Y330 459 aaPredicted RBP17.33■□□□□ 0.36
LINC01828-202ENST00000450294 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
LINC01828-202ENST00000450294 POTEHQ6S545 545 aa17.21■□□□□ 0.35
LINC01828-202ENST00000450294 ZBTB22O15209 634 aa17.15■□□□□ 0.34
LINC01828-202ENST00000450294 ATF5Q9Y2D1 282 aaPredicted RBP17.15■□□□□ 0.34
LINC01828-202ENST00000450294 AKT1S1Q96B36 256 aa16.95■□□□□ 0.3
LINC01828-202ENST00000450294 FBLN2P98095 1184 aa16.86■□□□□ 0.29
LINC01828-202ENST00000450294 CHRDL2Q6WN34 429 aa16.86■□□□□ 0.29
LINC01828-202ENST00000450294 OSCARQ8IYS5 282 aa16.83■□□□□ 0.28
LINC01828-202ENST00000450294 SPDYE2BA6NHP3 402 aa16.68■□□□□ 0.26
LINC01828-202ENST00000450294 SPDYE6P0CI01 402 aa16.68■□□□□ 0.26
LINC01828-202ENST00000450294 SPDYE2Q495Y8 402 aa16.68■□□□□ 0.26
LINC01828-202ENST00000450294 REM2Q8IYK8 340 aaPredicted RBP16.67■□□□□ 0.26
LINC01828-202ENST00000450294 CSRNP3Q8WYN3 585 aa16.49■□□□□ 0.23
LINC01828-202ENST00000450294 PITPNM1O00562 1244 aa16.47■□□□□ 0.23
LINC01828-202ENST00000450294 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
LINC01828-202ENST00000450294 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
LINC01828-202ENST00000450294 PIP4P2Q8N4L2 257 aa16.4■□□□□ 0.22
LINC01828-202ENST00000450294 SPDYE1Q8NFV5 336 aaPredicted RBP16.39■□□□□ 0.21
LINC01828-202ENST00000450294 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC01828-202ENST00000450294 SSUH2Q9Y2M2 353 aa16.35■□□□□ 0.21
LINC01828-202ENST00000450294 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
LINC01828-202ENST00000450294 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
LINC01828-202ENST00000450294 SP7Q8TDD2 431 aaPredicted RBP16.19■□□□□ 0.18
LINC01828-202ENST00000450294 HAX1O00165 279 aa16.17■□□□□ 0.18
LINC01828-202ENST00000450294 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
LINC01828-202ENST00000450294 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
LINC01828-202ENST00000450294 PRR29P0C7W0 189 aa16.05■□□□□ 0.16
LINC01828-202ENST00000450294 STAG3Q9UJ98 1225 aa15.91■□□□□ 0.14
LINC01828-202ENST00000450294 SPDYE4A6NLX3 237 aa15.84■□□□□ 0.13
LINC01828-202ENST00000450294 C19orf67A6NJJ6 358 aa15.82■□□□□ 0.12
LINC01828-202ENST00000450294 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
LINC01828-202ENST00000450294 EVX2Q03828 476 aa15.71■□□□□ 0.11
LINC01828-202ENST00000450294 FARP1Q9Y4F1 1045 aaPredicted RBP15.69■□□□□ 0.1
LINC01828-202ENST00000450294 CLCN6P51797 869 aa15.66■□□□□ 0.1
LINC01828-202ENST00000450294 CD44P16070 742 aaKnown RBP15.62■□□□□ 0.09
LINC01828-202ENST00000450294 GABBR2O75899 941 aa15.55■□□□□ 0.08
LINC01828-202ENST00000450294 CREBZFQ9NS37 354 aa15.52■□□□□ 0.08
LINC01828-202ENST00000450294 PAK3O75914 559 aaPredicted RBP15.49■□□□□ 0.07
LINC01828-202ENST00000450294 NPM1P06748 294 aaKnown RBP eCLIP15.49■□□□□ 0.07
LINC01828-202ENST00000450294 PROM2Q8N271 834 aa15.42■□□□□ 0.06
LINC01828-202ENST00000450294 ZNF579Q8NAF0 562 aaKnown RBP15.39■□□□□ 0.05
LINC01828-202ENST00000450294 ZRANB1Q9UGI0 708 aa15.39■□□□□ 0.05
LINC01828-202ENST00000450294 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
LINC01828-202ENST00000450294 DCBLD2Q96PD2 775 aa15.29■□□□□ 0.04
LINC01828-202ENST00000450294 MNX1P50219 401 aaPredicted RBP15.22■□□□□ 0.03
LINC01828-202ENST00000450294 LHX8Q68G74 356 aa15.17■□□□□ 0.02
LINC01828-202ENST00000450294 MIER1Q8N108 512 aa15.13■□□□□ 0.01
LINC01828-202ENST00000450294 ZBTB47Q9UFB7 747 aaPredicted RBP15.13■□□□□ 0.01
LINC01828-202ENST00000450294 POTEIP0CG38 1075 aa15.08■□□□□ 0
LINC01828-202ENST00000450294 GALR2O43603 387 aaPredicted RBP15.07■□□□□ 0
LINC01828-202ENST00000450294 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
LINC01828-202ENST00000450294 PHF12Q96QT6 1004 aa15.07■□□□□ 0
LINC01828-202ENST00000450294 FKBP8Q14318 412 aa15.05■□□□□ -0
LINC01828-202ENST00000450294 TSPYL2Q9H2G4 693 aaPredicted RBP15.01□□□□□ -0.01
LINC01828-202ENST00000450294 FBXO3Q9UK99 471 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms