Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NUBP1P53384 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NUBP1P53384 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
NUBP1P53384 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
NUBP1P53384 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 RNU6-263P-201ENST00000363811 107 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 RNU6-899P-201ENST00000363947 107 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 RNU6-213P-201ENST00000384051 104 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 UQCRHP1-204ENST00000424609 274 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC7.09□□□□□ -1.27
NUBP1P53384 GAPDHP20-201ENST00000444107 1007 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 TEX41-209ENST00000451478 452 ntTSL 2 BASIC7.09□□□□□ -1.27
NUBP1P53384 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC7.09□□□□□ -1.27
NUBP1P53384 RPL23AP24-201ENST00000458203 385 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 RN7SL413P-201ENST00000482700 297 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 AC107027.2-201ENST00000512197 115 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 AC004980.4-201ENST00000513375 203 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC7.09□□□□□ -1.27
NUBP1P53384 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.09□□□□□ -1.27
NUBP1P53384 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 MIR3613-201ENST00000579844 87 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.09□□□□□ -1.27
NUBP1P53384 AL161798.1-201ENST00000604630 131 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 U4.7-201ENST00000638126 106 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.09□□□□□ -1.27
NUBP1P53384 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.09□□□□□ -1.27
NUBP1P53384 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
NUBP1P53384 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 TRIM53BP-201ENST00000532912 1720 ntBASIC7.09□□□□□ -1.27
NUBP1P53384 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.09□□□□□ -1.27
NUBP1P53384 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
NUBP1P53384 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
NUBP1P53384 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.09□□□□□ -1.27
NUBP1P53384 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
NUBP1P53384 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
NUBP1P53384 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
NUBP1P53384 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC7.09□□□□□ -1.28
NUBP1P53384 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
NUBP1P53384 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.08□□□□□ -1.28
NUBP1P53384 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
NUBP1P53384 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.08□□□□□ -1.28
NUBP1P53384 FAM91A3P-201ENST00000456826 2544 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC7.08□□□□□ -1.28
NUBP1P53384 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUBP1P53384 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUBP1P53384 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUBP1P53384 AC108099.1-201ENST00000564402 3258 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUBP1P53384 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.08□□□□□ -1.28
NUBP1P53384 GNAS-202ENST00000306090 477 ntTSL 5 BASIC7.08□□□□□ -1.28
NUBP1P53384 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC7.08□□□□□ -1.28
NUBP1P53384 RNU6-1249P-201ENST00000363237 111 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 Y_RNA.309-201ENST00000365046 111 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 RNA5SP279-201ENST00000365513 117 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 RNU6-1248P-201ENST00000391096 64 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 EIF1AXP1-201ENST00000419267 435 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.08□□□□□ -1.28
NUBP1P53384 AL391987.1-201ENST00000441025 200 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 EEF1B2P7-201ENST00000451177 676 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 PPIAP21-201ENST00000464473 501 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.08□□□□□ -1.28
NUBP1P53384 AC006539.1-201ENST00000481419 501 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 COX6B1P2-201ENST00000489624 230 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 RPL23AP49-201ENST00000492925 468 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 RNU6-191P-201ENST00000516295 94 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 AC027308.1-201ENST00000517993 110 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 AP004242.1-201ENST00000533701 349 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.08□□□□□ -1.28
NUBP1P53384 AC005519.1-201ENST00000554490 601 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC7.08□□□□□ -1.28
NUBP1P53384 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.08□□□□□ -1.28
NUBP1P53384 MIR4502-201ENST00000580432 81 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.08□□□□□ -1.28
NUBP1P53384 DLD-214ENST00000639772 421 ntTSL 5 BASIC7.08□□□□□ -1.28
NUBP1P53384 AC007406.5-201ENST00000570140 3170 ntBASIC7.08□□□□□ -1.28
NUBP1P53384 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.08□□□□□ -1.28
NUBP1P53384 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
NUBP1P53384 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
NUBP1P53384 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUBP1P53384 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUBP1P53384 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUBP1P53384 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
NUBP1P53384 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NUBP1P53384 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NUBP1P53384 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms