Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VCANP13611 MIR26A1-201ENST00000362205 77 ntBASIC2.64□□□□□ -1.99
VCANP13611 RNU1-73P-201ENST00000383971 164 ntBASIC2.64□□□□□ -1.99
VCANP13611 CR769767.1-201ENST00000436337 346 ntBASIC2.64□□□□□ -1.99
VCANP13611 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
VCANP13611 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.64□□□□□ -1.99
VCANP13611 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VCANP13611 AL592494.2-201ENST00000425455 1548 ntBASIC2.63□□□□□ -1.99
VCANP13611 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCANP13611 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCANP13611 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCANP13611 AL023284.1-201ENST00000403956 276 ntBASIC2.63□□□□□ -1.99
VCANP13611 AC007064.1-201ENST00000412238 351 ntBASIC2.63□□□□□ -1.99
VCANP13611 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
VCANP13611 AC108078.3-201ENST00000502633 489 ntBASIC2.63□□□□□ -1.99
VCANP13611 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.63□□□□□ -1.99
VCANP13611 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.63□□□□□ -1.99
VCANP13611 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.63□□□□□ -1.99
VCANP13611 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.63□□□□□ -1.99
VCANP13611 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCANP13611 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCANP13611 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCANP13611 GLRXP1-201ENST00000423261 334 ntBASIC2.63□□□□□ -1.99
VCANP13611 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VCANP13611 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
VCANP13611 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCANP13611 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCANP13611 AC007395.1-201ENST00000451333 677 ntBASIC2.63□□□□□ -1.99
VCANP13611 TRBV26-201ENST00000456572 344 ntBASIC2.63□□□□□ -1.99
VCANP13611 AC103710.2-201ENST00000609912 942 ntBASIC2.63□□□□□ -1.99
VCANP13611 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
VCANP13611 AC011460.1-201ENST00000636268 1834 ntBASIC2.62□□□□□ -1.99
VCANP13611 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VCANP13611 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.62□□□□□ -1.99
VCANP13611 RPL23AP22-201ENST00000437556 453 ntBASIC2.62□□□□□ -1.99
VCANP13611 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.62□□□□□ -1.99
VCANP13611 AC006539.3-201ENST00000454258 129 ntBASIC2.62□□□□□ -1.99
VCANP13611 AC005840.1-201ENST00000498412 377 ntBASIC2.62□□□□□ -1.99
VCANP13611 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.62□□□□□ -1.99
VCANP13611 RNA5SP61-201ENST00000516453 100 ntBASIC2.62□□□□□ -1.99
VCANP13611 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.62□□□□□ -1.99
VCANP13611 LINC00216-201ENST00000623548 1126 ntBASIC2.62□□□□□ -1.99
VCANP13611 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.62□□□□□ -1.99
VCANP13611 AC017007.4-201ENST00000503353 1352 ntBASIC2.62□□□□□ -1.99
VCANP13611 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.62□□□□□ -1.99
VCANP13611 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VCANP13611 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
VCANP13611 RPLP0P7-201ENST00000416050 667 ntBASIC2.62□□□□□ -1.99
VCANP13611 AP1B1P2-201ENST00000416196 106 ntBASIC2.62□□□□□ -1.99
VCANP13611 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VCANP13611 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.62□□□□□ -1.99
VCANP13611 TGIF1P1-201ENST00000558095 802 ntBASIC2.62□□□□□ -1.99
VCANP13611 WISP1-OT1-201ENST00000602893 642 ntBASIC2.62□□□□□ -1.99
VCANP13611 AL589994.2-201ENST00000621124 579 ntBASIC2.62□□□□□ -1.99
VCANP13611 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.62□□□□□ -1.99
VCANP13611 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.61□□□□□ -1.99
VCANP13611 RPL23AP4-201ENST00000427757 463 ntBASIC2.61□□□□□ -1.99
VCANP13611 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.61□□□□□ -1.99
VCANP13611 NPM1P49-201ENST00000448027 714 ntBASIC2.61□□□□□ -1.99
VCANP13611 AC126118.1-201ENST00000607744 628 ntBASIC2.61□□□□□ -1.99
VCANP13611 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VCANP13611 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
VCANP13611 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
VCANP13611 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VCANP13611 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VCANP13611 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.61□□□□□ -1.99
VCANP13611 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.61□□□□□ -1.99
VCANP13611 RPS3AP4-201ENST00000555161 764 ntBASIC2.61□□□□□ -1.99
VCANP13611 AC110994.2-201ENST00000635481 492 ntBASIC2.61□□□□□ -1.99
VCANP13611 AC125336.1-201ENST00000508893 2827 ntBASIC2.61□□□□□ -1.99
VCANP13611 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
VCANP13611 AL138820.1-201ENST00000617901 5305 ntBASIC2.61□□□□□ -1.99
VCANP13611 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.61□□□□□ -1.99
VCANP13611 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.61□□□□□ -1.99
VCANP13611 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
VCANP13611 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
VCANP13611 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
VCANP13611 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VCANP13611 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
VCANP13611 RN7SKP58-201ENST00000411010 305 ntBASIC2.61□□□□□ -1.99
VCANP13611 HMGB1P16-201ENST00000447155 540 ntBASIC2.61□□□□□ -1.99
VCANP13611 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.61□□□□□ -1.99
VCANP13611 RAC1P5-201ENST00000512182 576 ntBASIC2.61□□□□□ -1.99
VCANP13611 VN1R80P-201ENST00000597126 338 ntBASIC2.61□□□□□ -1.99
VCANP13611 MIR6873-201ENST00000622788 63 ntBASIC2.61□□□□□ -1.99
VCANP13611 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VCANP13611 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.6□□□□□ -1.99
VCANP13611 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
VCANP13611 AC009238.1-201ENST00000442165 424 ntBASIC2.6□□□□□ -1.99
VCANP13611 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.6□□□□□ -1.99
VCANP13611 AC009237.6-201ENST00000446969 424 ntBASIC2.6□□□□□ -1.99
VCANP13611 AL024509.2-201ENST00000493462 493 ntBASIC2.6□□□□□ -1.99
VCANP13611 SNORA31.1-201ENST00000515993 133 ntBASIC2.6□□□□□ -1.99
VCANP13611 SNORA31.5-201ENST00000516190 133 ntBASIC2.6□□□□□ -1.99
VCANP13611 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.6□□□□□ -1.99
VCANP13611 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.6□□□□□ -1.99
VCANP13611 TTC39DP-201ENST00000416781 1688 ntBASIC2.6□□□□□ -1.99
VCANP13611 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
VCANP13611 ELL2P4-201ENST00000446870 1376 ntBASIC2.6□□□□□ -1.99
VCANP13611 FGF7P8-201ENST00000402994 292 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms