Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 AC134043.2-201ENST00000624206 2238 ntBASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.21□□□□□ -0.29
SPCS1Q9Y6A9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
SPCS1Q9Y6A9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SPCS1Q9Y6A9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SPCS1Q9Y6A9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SPCS1Q9Y6A9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SPCS1Q9Y6A9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SPCS1Q9Y6A9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SPCS1Q9Y6A9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 LBH-205ENST00000407930 756 ntTSL 2 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 AL157400.5-201ENST00000507624 621 ntBASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 AC092850.2-201ENST00000623821 2697 ntBASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 AL161938.1-201ENST00000569833 2180 ntBASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC13.2□□□□□ -0.3
SPCS1Q9Y6A9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 AL645608.8-201ENST00000606034 2086 ntBASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS1Q9Y6A9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms