Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 NIFKP9-201ENST00000419265 221 ntBASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 RBM17P1-201ENST00000453646 1190 ntBASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 NUDT16P1-203ENST00000513809 620 ntBASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HRH3Q9Y5N1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 KRT8P8-201ENST00000434750 1448 ntBASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.74■□□□□ 0.43
HRH3Q9Y5N1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 AP002982.1-201ENST00000492365 877 ntBASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HRH3Q9Y5N1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 AP000525.1-201ENST00000608286 694 ntBASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 CR392000.1-201ENST00000624770 1228 ntBASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms