Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 EGLN1P1-201ENST00000531623 762 ntBASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA3Q9Y5H0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 AC018553.1-201ENST00000616682 1458 ntBASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 TSPY14P-201ENST00000303979 915 ntBASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 AC131212.4-201ENST00000623606 975 ntBASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 FP700111.2-201ENST00000619190 1892 ntBASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA3Q9Y5H0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA3Q9Y5H0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PCDHGA3Q9Y5H0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
PCDHGA3Q9Y5H0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
PCDHGA3Q9Y5H0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PCDHGA3Q9Y5H0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGA3Q9Y5H0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGA3Q9Y5H0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 AC011506.1-201ENST00000474329 610 ntBASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA3Q9Y5H0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms