Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB13Q9Y5F0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHB13Q9Y5F0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 AP001412.1-201ENST00000608405 714 ntBASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHB13Q9Y5F0 KRT16P1-201ENST00000399124 1418 ntBASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 RPS2P55-201ENST00000397318 883 ntBASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 AC107956.1-201ENST00000494359 873 ntBASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 CR392000.1-201ENST00000624770 1228 ntBASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB13Q9Y5F0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
PCDHB13Q9Y5F0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 AC120498.9-201ENST00000339021 3867 ntBASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 AC012618.2-201ENST00000428058 849 ntBASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 AC004980.1-204ENST00000429707 299 ntBASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 AP006294.2-201ENST00000641667 209 ntBASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB13Q9Y5F0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms