Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 POM121L13P-201ENST00000422362 380 ntBASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 KRT18P16-201ENST00000510337 1294 ntBASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 AC008403.3-201ENST00000598924 454 ntBASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
RNF11Q9Y3C5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 SDHAP1-207ENST00000440850 2000 ntBASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF11Q9Y3C5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 RNA5SP413-201ENST00000516373 109 ntBASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF11Q9Y3C5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 AL161938.1-201ENST00000569833 2180 ntBASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 TUBB8P6-201ENST00000436895 1288 ntBASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 AC141586.3-201ENST00000562166 1838 ntBASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 AIRN-201ENST00000601203 4374 ntBASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF11Q9Y3C5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RNF11Q9Y3C5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms