Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPRKBQ9Y3C4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TPRKBQ9Y3C4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
TPRKBQ9Y3C4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TPRKBQ9Y3C4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.57■□□□□ 0.4
TPRKBQ9Y3C4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 IRX1P1-201ENST00000438849 1838 ntBASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPRKBQ9Y3C4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 RASA4CP-201ENST00000424092 1398 ntBASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPRKBQ9Y3C4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPRKBQ9Y3C4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPRKBQ9Y3C4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms