Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.55■□□□□ 0.24
MRPS28Q9Y2Q9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 AC124283.5-201ENST00000624661 1809 ntBASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 AC104417.2-201ENST00000562989 1793 ntBASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 SDHAP1-207ENST00000440850 2000 ntBASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 AC080038.1-201ENST00000611274 1154 ntBASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 AC006557.6-201ENST00000623071 864 ntBASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.54■□□□□ 0.24
MRPS28Q9Y2Q9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 RPS2P52-201ENST00000469610 820 ntBASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 AL050303.2-201ENST00000619798 666 ntBASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 AC073111.5-205ENST00000641717 521 ntBASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPS28Q9Y2Q9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 IRX1P1-201ENST00000438849 1838 ntBASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.52■□□□□ 0.24
MRPS28Q9Y2Q9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms