Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H4Q9UPT8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.3■■□□□ 1.32
ZC3H4Q9UPT8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
ZC3H4Q9UPT8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.3■■□□□ 1.32
ZC3H4Q9UPT8 AC092183.1-201ENST00000469884 875 ntBASIC23.3■■□□□ 1.32
ZC3H4Q9UPT8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
ZC3H4Q9UPT8 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.3■■□□□ 1.32
ZC3H4Q9UPT8 MIR4674-201ENST00000582457 87 ntBASIC23.3■■□□□ 1.32
ZC3H4Q9UPT8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H4Q9UPT8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3H4Q9UPT8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 FBXW4P1-201ENST00000426721 2239 ntBASIC23.28■■□□□ 1.32
ZC3H4Q9UPT8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 FAM220CP-201ENST00000395253 831 ntBASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 AL590627.1-203ENST00000421194 1026 ntBASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 FOSL1P1-201ENST00000511041 816 ntBASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 AP000867.3-201ENST00000524675 377 ntBASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 AL049796.1-201ENST00000565336 1766 ntBASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.27■■□□□ 1.32
ZC3H4Q9UPT8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 KRT8P11-201ENST00000409686 1436 ntBASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 MIR574-201ENST00000385209 96 ntBASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 TSPY12P-201ENST00000421279 868 ntBASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 LINC00265-3P-201ENST00000447588 903 ntBASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.26■■□□□ 1.31
ZC3H4Q9UPT8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms