Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 Z98044.1-201ENST00000632503 1764 ntBASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 ITM2C-210ENST00000620962 501 ntBASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 AC005332.8-201ENST00000622750 2735 ntBASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SALL4Q9UJQ4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 AC090164.3-201ENST00000610780 2143 ntBASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL4Q9UJQ4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 AP006587.1-201ENST00000534129 1502 ntBASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 AL390961.4-201ENST00000623958 2535 ntBASIC20.4■□□□□ 0.86
SALL4Q9UJQ4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SALL4Q9UJQ4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.39■□□□□ 0.86
SALL4Q9UJQ4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SALL4Q9UJQ4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SALL4Q9UJQ4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SALL4Q9UJQ4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SALL4Q9UJQ4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SALL4Q9UJQ4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 KRT18P29-201ENST00000397031 1267 ntBASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 YBX1P10-201ENST00000444752 975 ntBASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 AC083880.1-201ENST00000608266 535 ntBASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SALL4Q9UJQ4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms