Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 OR6D1P-202ENST00000641007 5290 ntBASIC18.61■□□□□ 0.57
NDE1Q9NXR1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 AL162412.1-201ENST00000567129 965 ntBASIC18.6■□□□□ 0.57
NDE1Q9NXR1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NDE1Q9NXR1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 TERF1P2-201ENST00000583350 1212 ntBASIC18.59■□□□□ 0.57
NDE1Q9NXR1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NDE1Q9NXR1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
NDE1Q9NXR1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms