Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 MIR935-201ENST00000401179 91 ntBASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 AC007613.1-201ENST00000572811 2597 ntBASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 AC124283.5-201ENST00000624661 1809 ntBASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
THUMPD1Q9NXG2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 KRT18P16-201ENST00000510337 1294 ntBASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 AL138781.1-201ENST00000566567 1274 ntBASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 TEX21P-204ENST00000641479 1693 ntBASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THUMPD1Q9NXG2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 AC104417.2-201ENST00000562989 1793 ntBASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 TUBB8P6-201ENST00000436895 1288 ntBASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 AC133041.1-202ENST00000642053 222 ntBASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.05■□□□□ 0.48
THUMPD1Q9NXG2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms