Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3BQ9H321 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3BQ9H321 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 SERBP1P1-201ENST00000396021 1160 ntBASIC18.31■□□□□ 0.52
VCX3BQ9H321 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3BQ9H321 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 DUX4L19-201ENST00000557448 1267 ntBASIC18.31■□□□□ 0.52
VCX3BQ9H321 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3BQ9H321 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3BQ9H321 SIRPAP1-201ENST00000448467 1770 ntBASIC18.31■□□□□ 0.52
VCX3BQ9H321 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3BQ9H321 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3BQ9H321 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3BQ9H321 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3BQ9H321 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3BQ9H321 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.3■□□□□ 0.52
VCX3BQ9H321 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
VCX3BQ9H321 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 HSD17B1P1-201ENST00000590052 955 ntBASIC18.3■□□□□ 0.52
VCX3BQ9H321 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.3■□□□□ 0.52
VCX3BQ9H321 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.3■□□□□ 0.52
VCX3BQ9H321 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
VCX3BQ9H321 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.3■□□□□ 0.52
VCX3BQ9H321 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.3■□□□□ 0.52
VCX3BQ9H321 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCX3BQ9H321 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
VCX3BQ9H321 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.29■□□□□ 0.52
VCX3BQ9H321 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
VCX3BQ9H321 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VCX3BQ9H321 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.29■□□□□ 0.52
VCX3BQ9H321 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.29■□□□□ 0.52
VCX3BQ9H321 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCX3BQ9H321 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.29■□□□□ 0.52
VCX3BQ9H321 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.29■□□□□ 0.52
VCX3BQ9H321 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VCX3BQ9H321 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VCX3BQ9H321 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.28■□□□□ 0.52
VCX3BQ9H321 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCX3BQ9H321 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
VCX3BQ9H321 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
VCX3BQ9H321 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.28■□□□□ 0.52
VCX3BQ9H321 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCX3BQ9H321 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCX3BQ9H321 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VCX3BQ9H321 PGM5P4-201ENST00000421970 445 ntBASIC18.28■□□□□ 0.52
VCX3BQ9H321 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCX3BQ9H321 AL356740.2-201ENST00000601559 647 ntBASIC18.28■□□□□ 0.52
VCX3BQ9H321 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.28■□□□□ 0.52
VCX3BQ9H321 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
VCX3BQ9H321 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCX3BQ9H321 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.28■□□□□ 0.52
VCX3BQ9H321 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VCX3BQ9H321 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VCX3BQ9H321 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCX3BQ9H321 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VCX3BQ9H321 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VCX3BQ9H321 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.28■□□□□ 0.52
VCX3BQ9H321 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms