Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
KRTAP3-3Q9BYR6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AC135279.3-201ENST00000610945 1311 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 RNU4-76P-201ENST00000364509 141 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AL050335.1-201ENST00000396909 869 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 OR8G2P-201ENST00000412796 908 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AL592310.1-201ENST00000414330 671 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 GYG1P2-201ENST00000426437 1006 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 RPL7P7-201ENST00000428803 703 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 TPTE2P1-202ENST00000429698 770 ntTSL 3 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AC245047.6-201ENST00000445444 617 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 snoU109.3-201ENST00000459477 145 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AC007992.1-201ENST00000513953 953 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 MTND4LP26-201ENST00000518144 282 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 SLC25A51P3-201ENST00000521814 889 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AC144568.2-201ENST00000522481 944 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 OR8G3P-201ENST00000533406 921 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 CYB5AP5-201ENST00000549779 389 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 ZNF415P1-201ENST00000582279 1166 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AL513548.2-201ENST00000602994 1207 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AC044849.2-201ENST00000606596 710 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AP003072.4-201ENST00000624580 310 ntBASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP3-3Q9BYR6 TUBB1P2-201ENST00000422712 1306 ntBASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AL049869.1-201ENST00000556933 1402 ntBASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 MYF5-201ENST00000228644 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 HLA-DQB1-203ENST00000399082 1219 ntBASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 UST-AS1-201ENST00000413845 714 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 SLC8A1-AS1-203ENST00000418854 545 ntTSL 4 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 MFSD13B-201ENST00000420133 1290 ntBASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AC092865.3-201ENST00000425390 1026 ntBASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 UBE2D3P1-201ENST00000436669 444 ntBASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 EIF2S2P2-201ENST00000447161 982 ntBASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 RPEP1-201ENST00000504507 658 ntBASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AC025773.1-201ENST00000513859 559 ntTSL 4 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AC022880.1-201ENST00000534017 973 ntBASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AC118658.1-201ENST00000560221 334 ntTSL 5 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AL356752.1-201ENST00000615844 593 ntBASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AL359740.1-201ENST00000624340 592 ntBASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 GLRX-202ENST00000379979 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 PQLC2L-203ENST00000449199 1484 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC11.88□□□□□ -0.51
KRTAP3-3Q9BYR6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC092451.3-201ENST00000625067 1343 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 AC004381.2-201ENST00000637768 1329 ntBASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC11.87□□□□□ -0.51
KRTAP3-3Q9BYR6 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms