Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 AC007663.1-201ENST00000438948 1240 ntBASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 AC026271.3-201ENST00000571884 352 ntBASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 TREX1-205ENST00000625293 1783 ntBASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
KRTAP4-3Q9BYR4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 TSPY14P-201ENST00000303979 915 ntBASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 C2orf69P3-201ENST00000565542 1120 ntBASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 AP005242.2-201ENST00000580065 1175 ntBASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 MIR4674-201ENST00000582457 87 ntBASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 AL023973.1-201ENST00000624619 620 ntBASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 AC099343.3-201ENST00000605834 2503 ntBASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
KRTAP4-3Q9BYR4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
KRTAP4-3Q9BYR4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
KRTAP4-3Q9BYR4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-3Q9BYR4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms