Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 AC006333.2-201ENST00000607957 2099 ntBASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 WIZP1-201ENST00000531444 2299 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 AP000997.3-201ENST00000623333 2250 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 KRT16P6-202ENST00000425692 1426 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 BX842568.3-201ENST00000418104 571 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PGM5P4-201ENST00000421970 445 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 MIR3621-201ENST00000580529 85 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 AC126544.1-201ENST00000580842 1059 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 AC105233.4-201ENST00000642045 216 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 NOC2LP2-201ENST00000407594 1944 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 Z98044.1-201ENST00000632503 1764 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms