Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 AL355355.2-201ENST00000442321 338 ntBASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 CD177P1-201ENST00000606252 935 ntBASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 AP001271.2-201ENST00000624018 1556 ntBASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.11■□□□□ 0.17
PCGF1Q9BSM1 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 TUBB8P6-201ENST00000436895 1288 ntBASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 AC073195.1-201ENST00000607241 877 ntBASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCGF1Q9BSM1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 AC026471.5-201ENST00000615068 467 ntBASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCGF1Q9BSM1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms