Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 DUSP5P2-201ENST00000426873 1033 ntBASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 AC073210.2-201ENST00000430369 194 ntBASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HDHD3Q9BSH5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 WIZP1-201ENST00000531444 2299 ntBASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HDHD3Q9BSH5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 AC026471.1-201ENST00000564629 3026 ntBASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 MIPEPP3-201ENST00000412105 444 ntBASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 CROCCP5-201ENST00000436658 830 ntBASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HDHD3Q9BSH5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HDHD3Q9BSH5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.21■□□□□ 0.18
HDHD3Q9BSH5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
HDHD3Q9BSH5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HDHD3Q9BSH5 AC018470.1-201ENST00000624790 3129 ntBASIC16.21■□□□□ 0.18
HDHD3Q9BSH5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 IRX1P1-201ENST00000438849 1838 ntBASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 AC026185.1-201ENST00000445748 174 ntBASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms