Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE1Q99829 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE1Q99829 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE1Q99829 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CPNE1Q99829 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.22■□□□□ 0.67
CPNE1Q99829 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 NEFHP1-201ENST00000412845 2629 ntBASIC19.21■□□□□ 0.67
CPNE1Q99829 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE1Q99829 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.21■□□□□ 0.67
CPNE1Q99829 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 MIR935-201ENST00000401179 91 ntBASIC19.21■□□□□ 0.67
CPNE1Q99829 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 FEM1AP3-201ENST00000403722 1741 ntBASIC19.21■□□□□ 0.67
CPNE1Q99829 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE1Q99829 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 SOX15-203ENST00000570788 1093 ntBASIC19.21■□□□□ 0.67
CPNE1Q99829 AC008687.6-201ENST00000596318 630 ntBASIC19.21■□□□□ 0.67
CPNE1Q99829 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE1Q99829 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE1Q99829 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 Z98044.1-201ENST00000632503 1764 ntBASIC19.21■□□□□ 0.67
CPNE1Q99829 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CPNE1Q99829 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE1Q99829 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CPNE1Q99829 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE1Q99829 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.2■□□□□ 0.66
CPNE1Q99829 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE1Q99829 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE1Q99829 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.2■□□□□ 0.66
CPNE1Q99829 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.2■□□□□ 0.66
CPNE1Q99829 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.2■□□□□ 0.66
CPNE1Q99829 AL138781.1-201ENST00000566567 1274 ntBASIC19.2■□□□□ 0.66
CPNE1Q99829 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.2■□□□□ 0.66
CPNE1Q99829 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.2■□□□□ 0.66
CPNE1Q99829 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.2■□□□□ 0.66
CPNE1Q99829 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.2■□□□□ 0.66
CPNE1Q99829 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CPNE1Q99829 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.2■□□□□ 0.66
CPNE1Q99829 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CPNE1Q99829 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CPNE1Q99829 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE1Q99829 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE1Q99829 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPNE1Q99829 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE1Q99829 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.2■□□□□ 0.66
CPNE1Q99829 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE1Q99829 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE1Q99829 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CPNE1Q99829 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE1Q99829 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE1Q99829 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CPNE1Q99829 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE1Q99829 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.19■□□□□ 0.66
CPNE1Q99829 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CPNE1Q99829 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE1Q99829 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE1Q99829 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE1Q99829 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.19■□□□□ 0.66
CPNE1Q99829 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE1Q99829 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE1Q99829 AC098934.4-201ENST00000564127 592 ntBASIC19.19■□□□□ 0.66
CPNE1Q99829 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.19■□□□□ 0.66
CPNE1Q99829 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.19■□□□□ 0.66
CPNE1Q99829 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE1Q99829 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CPNE1Q99829 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
CPNE1Q99829 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CPNE1Q99829 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms