Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
TM9SF2Q99805 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF2Q99805 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF2Q99805 HCG11-201ENST00000411553 5696 ntBASIC17.82■□□□□ 0.44
TM9SF2Q99805 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF2Q99805 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF2Q99805 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
TM9SF2Q99805 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.81■□□□□ 0.44
TM9SF2Q99805 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF2Q99805 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF2Q99805 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF2Q99805 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF2Q99805 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF2Q99805 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF2Q99805 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF2Q99805 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF2Q99805 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF2Q99805 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF2Q99805 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF2Q99805 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF2Q99805 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF2Q99805 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF2Q99805 AP001412.1-201ENST00000608405 714 ntBASIC17.81■□□□□ 0.44
TM9SF2Q99805 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.81■□□□□ 0.44
TM9SF2Q99805 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TM9SF2Q99805 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF2Q99805 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 AL596275.1-201ENST00000423464 877 ntBASIC17.8■□□□□ 0.44
TM9SF2Q99805 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.8■□□□□ 0.44
TM9SF2Q99805 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF2Q99805 Z82202.1-201ENST00000623446 1880 ntBASIC17.8■□□□□ 0.44
TM9SF2Q99805 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.8■□□□□ 0.44
TM9SF2Q99805 PTBP1P-201ENST00000554374 1601 ntBASIC17.8■□□□□ 0.44
TM9SF2Q99805 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 BX119927.1-201ENST00000636596 1552 ntBASIC17.79■□□□□ 0.44
TM9SF2Q99805 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
TM9SF2Q99805 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF2Q99805 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TM9SF2Q99805 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TM9SF2Q99805 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 AC012618.2-201ENST00000428058 849 ntBASIC17.79■□□□□ 0.44
TM9SF2Q99805 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF2Q99805 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF2Q99805 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.79■□□□□ 0.44
TM9SF2Q99805 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.79■□□□□ 0.44
TM9SF2Q99805 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.79■□□□□ 0.44
TM9SF2Q99805 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TM9SF2Q99805 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF2Q99805 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TM9SF2Q99805 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF2Q99805 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.78■□□□□ 0.44
TM9SF2Q99805 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms