Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 SLC7A5P2-201ENST00000553010 536 ntBASIC14.5□□□□□ -0.09
AP1S3Q96PC3 AL136967.2-201ENST00000623968 743 ntBASIC14.5□□□□□ -0.09
AP1S3Q96PC3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 AC093484.2-201ENST00000580996 2166 ntBASIC14.5□□□□□ -0.09
AP1S3Q96PC3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 TREX1-205ENST00000625293 1783 ntBASIC14.5□□□□□ -0.09
AP1S3Q96PC3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S3Q96PC3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.49□□□□□ -0.09
AP1S3Q96PC3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 AC091799.1-201ENST00000422823 811 ntBASIC14.49□□□□□ -0.09
AP1S3Q96PC3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP1S3Q96PC3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 AL133373.2-201ENST00000623187 2828 ntBASIC14.48□□□□□ -0.09
AP1S3Q96PC3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms