Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CASD1Q96PB1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.53■□□□□ 0.88
CASD1Q96PB1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 VENTXP5-201ENST00000523979 775 ntBASIC20.53■□□□□ 0.88
CASD1Q96PB1 ZNF444P1-201ENST00000559497 298 ntBASIC20.53■□□□□ 0.88
CASD1Q96PB1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CASD1Q96PB1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 SDHAP1-207ENST00000440850 2000 ntBASIC20.53■□□□□ 0.88
CASD1Q96PB1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.53■□□□□ 0.88
CASD1Q96PB1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASD1Q96PB1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CASD1Q96PB1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASD1Q96PB1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASD1Q96PB1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASD1Q96PB1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.52■□□□□ 0.88
CASD1Q96PB1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.52■□□□□ 0.88
CASD1Q96PB1 SPDYE15P-201ENST00000424157 909 ntBASIC20.52■□□□□ 0.88
CASD1Q96PB1 TSPY21P-201ENST00000433481 731 ntBASIC20.52■□□□□ 0.88
CASD1Q96PB1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.52■□□□□ 0.88
CASD1Q96PB1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASD1Q96PB1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.52■□□□□ 0.88
CASD1Q96PB1 KRT126P-201ENST00000549467 1181 ntBASIC20.52■□□□□ 0.88
CASD1Q96PB1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
CASD1Q96PB1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASD1Q96PB1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASD1Q96PB1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CASD1Q96PB1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.52■□□□□ 0.88
CASD1Q96PB1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASD1Q96PB1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.52■□□□□ 0.88
CASD1Q96PB1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASD1Q96PB1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 LINC01311-201ENST00000565162 1445 ntBASIC20.51■□□□□ 0.87
CASD1Q96PB1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.51■□□□□ 0.87
CASD1Q96PB1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.5■□□□□ 0.87
CASD1Q96PB1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 KRT18P48-201ENST00000434763 852 ntBASIC20.5■□□□□ 0.87
CASD1Q96PB1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.5■□□□□ 0.87
CASD1Q96PB1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CASD1Q96PB1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.5■□□□□ 0.87
CASD1Q96PB1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.5■□□□□ 0.87
CASD1Q96PB1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.5■□□□□ 0.87
CASD1Q96PB1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.5■□□□□ 0.87
CASD1Q96PB1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.5■□□□□ 0.87
CASD1Q96PB1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.5■□□□□ 0.87
CASD1Q96PB1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms