Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL21A1Q96P44 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL21A1Q96P44 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL21A1Q96P44 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL21A1Q96P44 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL21A1Q96P44 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.16■□□□□ 0.5
COL21A1Q96P44 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
COL21A1Q96P44 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.15■□□□□ 0.5
COL21A1Q96P44 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.15■□□□□ 0.5
COL21A1Q96P44 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
COL21A1Q96P44 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.15■□□□□ 0.5
COL21A1Q96P44 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.15■□□□□ 0.5
COL21A1Q96P44 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL21A1Q96P44 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COL21A1Q96P44 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.15■□□□□ 0.5
COL21A1Q96P44 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL21A1Q96P44 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.15■□□□□ 0.5
COL21A1Q96P44 NEFHP1-201ENST00000412845 2629 ntBASIC18.15■□□□□ 0.5
COL21A1Q96P44 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL21A1Q96P44 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL21A1Q96P44 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
COL21A1Q96P44 AP006587.1-201ENST00000534129 1502 ntBASIC18.13■□□□□ 0.49
COL21A1Q96P44 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 AC239809.2-201ENST00000415381 517 ntBASIC18.13■□□□□ 0.49
COL21A1Q96P44 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 AL023875.1-201ENST00000640777 796 ntBASIC18.13■□□□□ 0.49
COL21A1Q96P44 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL21A1Q96P44 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COL21A1Q96P44 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 AC026471.1-201ENST00000564629 3026 ntBASIC18.12■□□□□ 0.49
COL21A1Q96P44 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms