Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC092368.3-202ENST00000574180 1591 ntBASIC20.33■□□□□ 0.84
CALR3Q96L12 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALR3Q96L12 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.84
CALR3Q96L12 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALR3Q96L12 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CALR3Q96L12 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CALR3Q96L12 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALR3Q96L12 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.32■□□□□ 0.84
CALR3Q96L12 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CALR3Q96L12 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CALR3Q96L12 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALR3Q96L12 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALR3Q96L12 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CALR3Q96L12 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CALR3Q96L12 SLC29A4P1-201ENST00000398760 971 ntBASIC20.32■□□□□ 0.84
CALR3Q96L12 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.32■□□□□ 0.84
CALR3Q96L12 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.32■□□□□ 0.84
CALR3Q96L12 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.32■□□□□ 0.84
CALR3Q96L12 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.32■□□□□ 0.84
CALR3Q96L12 AC060766.5-201ENST00000590539 871 ntBASIC20.32■□□□□ 0.84
CALR3Q96L12 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.32■□□□□ 0.84
CALR3Q96L12 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CALR3Q96L12 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALR3Q96L12 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.32■□□□□ 0.84
CALR3Q96L12 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALR3Q96L12 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CALR3Q96L12 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.32■□□□□ 0.84
CALR3Q96L12 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALR3Q96L12 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALR3Q96L12 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CALR3Q96L12 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
CALR3Q96L12 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.32■□□□□ 0.84
CALR3Q96L12 AC124283.5-201ENST00000624661 1809 ntBASIC20.32■□□□□ 0.84
CALR3Q96L12 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CALR3Q96L12 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.31■□□□□ 0.84
CALR3Q96L12 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CALR3Q96L12 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CALR3Q96L12 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CALR3Q96L12 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.31■□□□□ 0.84
CALR3Q96L12 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.31■□□□□ 0.84
CALR3Q96L12 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.31■□□□□ 0.84
CALR3Q96L12 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.31■□□□□ 0.84
CALR3Q96L12 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.31■□□□□ 0.84
CALR3Q96L12 AC120498.8-201ENST00000614275 531 ntBASIC20.31■□□□□ 0.84
CALR3Q96L12 MYC-209ENST00000641252 345 ntBASIC20.31■□□□□ 0.84
CALR3Q96L12 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.31■□□□□ 0.84
CALR3Q96L12 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
CALR3Q96L12 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.31■□□□□ 0.84
CALR3Q96L12 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.31■□□□□ 0.84
CALR3Q96L12 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CALR3Q96L12 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CALR3Q96L12 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CALR3Q96L12 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.3■□□□□ 0.84
CALR3Q96L12 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALR3Q96L12 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALR3Q96L12 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CALR3Q96L12 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.3■□□□□ 0.84
CALR3Q96L12 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.3■□□□□ 0.84
CALR3Q96L12 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALR3Q96L12 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.3■□□□□ 0.84
CALR3Q96L12 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.3■□□□□ 0.84
CALR3Q96L12 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CALR3Q96L12 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALR3Q96L12 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CALR3Q96L12 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CALR3Q96L12 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CALR3Q96L12 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.3■□□□□ 0.84
CALR3Q96L12 AC006970.2-201ENST00000450065 779 ntBASIC20.3■□□□□ 0.84
CALR3Q96L12 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.3■□□□□ 0.84
CALR3Q96L12 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.3■□□□□ 0.84
CALR3Q96L12 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CALR3Q96L12 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CALR3Q96L12 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CALR3Q96L12 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALR3Q96L12 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALR3Q96L12 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALR3Q96L12 AC009113.1-201ENST00000570267 2443 ntBASIC20.29■□□□□ 0.84
CALR3Q96L12 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CALR3Q96L12 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.29■□□□□ 0.84
CALR3Q96L12 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CALR3Q96L12 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALR3Q96L12 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CALR3Q96L12 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CALR3Q96L12 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALR3Q96L12 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.29■□□□□ 0.84
CALR3Q96L12 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALR3Q96L12 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms