Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMD4Q96H15 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TIMD4Q96H15 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 CCR12P-201ENST00000446203 998 ntBASIC16.16■□□□□ 0.18
TIMD4Q96H15 AC091390.4-202ENST00000476426 537 ntBASIC16.16■□□□□ 0.18
TIMD4Q96H15 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 AC012306.2-201ENST00000609350 630 ntBASIC16.16■□□□□ 0.18
TIMD4Q96H15 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMD4Q96H15 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMD4Q96H15 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TIMD4Q96H15 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.16■□□□□ 0.18
TIMD4Q96H15 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 AC096733.2-201ENST00000609937 1394 ntBASIC16.15■□□□□ 0.18
TIMD4Q96H15 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 EGLN1P1-201ENST00000531623 762 ntBASIC16.15■□□□□ 0.18
TIMD4Q96H15 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TIMD4Q96H15 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TIMD4Q96H15 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.14■□□□□ 0.18
TIMD4Q96H15 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TIMD4Q96H15 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.14■□□□□ 0.17
TIMD4Q96H15 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.14■□□□□ 0.17
TIMD4Q96H15 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 KRT8P9-201ENST00000558927 1449 ntBASIC16.14■□□□□ 0.17
TIMD4Q96H15 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.14■□□□□ 0.17
TIMD4Q96H15 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.14■□□□□ 0.17
TIMD4Q96H15 KRT18P21-201ENST00000515767 1272 ntBASIC16.14■□□□□ 0.17
TIMD4Q96H15 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.14■□□□□ 0.17
TIMD4Q96H15 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.14■□□□□ 0.17
TIMD4Q96H15 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.14■□□□□ 0.17
TIMD4Q96H15 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.14■□□□□ 0.17
TIMD4Q96H15 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.14■□□□□ 0.17
TIMD4Q96H15 AC010947.1-201ENST00000623454 693 ntBASIC16.14■□□□□ 0.17
TIMD4Q96H15 AC116562.4-202ENST00000641738 218 ntBASIC16.14■□□□□ 0.17
TIMD4Q96H15 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.14■□□□□ 0.17
TIMD4Q96H15 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.14■□□□□ 0.17
TIMD4Q96H15 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMD4Q96H15 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.14■□□□□ 0.17
TIMD4Q96H15 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms