Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 RBM17P2-201ENST00000616397 1405 ntBASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 PHGDH-210ENST00000641115 1638 ntBASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 AC139713.2-201ENST00000641328 2723 ntBASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 KRT8P20-201ENST00000423953 1409 ntBASIC19.34■□□□□ 0.69
CHMP6Q96FZ7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CHMP6Q96FZ7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.33■□□□□ 0.69
CHMP6Q96FZ7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP6Q96FZ7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP6Q96FZ7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP6Q96FZ7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP6Q96FZ7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP6Q96FZ7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP6Q96FZ7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP6Q96FZ7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 CDV3P1-201ENST00000471403 739 ntBASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP6Q96FZ7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms