Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF31Q96EP0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF31Q96EP0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RNF31Q96EP0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
RNF31Q96EP0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF31Q96EP0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF31Q96EP0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF31Q96EP0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RNF31Q96EP0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
RNF31Q96EP0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF31Q96EP0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF31Q96EP0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 AC113347.1-201ENST00000413321 391 ntBASIC18.51■□□□□ 0.55
RNF31Q96EP0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF31Q96EP0 SLC25A3P1-201ENST00000443844 931 ntBASIC18.51■□□□□ 0.55
RNF31Q96EP0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF31Q96EP0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF31Q96EP0 AC011298.2-201ENST00000617989 482 ntBASIC18.51■□□□□ 0.55
RNF31Q96EP0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF31Q96EP0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF31Q96EP0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF31Q96EP0 RCC2P6-201ENST00000526625 1557 ntBASIC18.51■□□□□ 0.55
RNF31Q96EP0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF31Q96EP0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 AC131212.4-201ENST00000623606 975 ntBASIC18.5■□□□□ 0.55
RNF31Q96EP0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 FSCN1P1-201ENST00000568912 1481 ntBASIC18.5■□□□□ 0.55
RNF31Q96EP0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RNF31Q96EP0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 AC092865.7-201ENST00000641832 219 ntBASIC18.49■□□□□ 0.55
RNF31Q96EP0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF31Q96EP0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 KRT18P22-201ENST00000402024 1347 ntBASIC18.49■□□□□ 0.55
RNF31Q96EP0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF31Q96EP0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms