Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.51■□□□□ 0.39
HPS1Q92902 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.51■□□□□ 0.39
HPS1Q92902 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HPS1Q92902 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.51■□□□□ 0.39
HPS1Q92902 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.51■□□□□ 0.39
HPS1Q92902 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.51■□□□□ 0.39
HPS1Q92902 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.51■□□□□ 0.39
HPS1Q92902 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.51■□□□□ 0.39
HPS1Q92902 AC092118.2-201ENST00000613495 667 ntBASIC17.51■□□□□ 0.39
HPS1Q92902 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HPS1Q92902 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.51■□□□□ 0.39
HPS1Q92902 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.51■□□□□ 0.39
HPS1Q92902 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HPS1Q92902 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.51■□□□□ 0.39
HPS1Q92902 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.51■□□□□ 0.39
HPS1Q92902 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS1Q92902 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS1Q92902 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
HPS1Q92902 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS1Q92902 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS1Q92902 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HPS1Q92902 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS1Q92902 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.5■□□□□ 0.39
HPS1Q92902 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HPS1Q92902 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HPS1Q92902 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.5■□□□□ 0.39
HPS1Q92902 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS1Q92902 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS1Q92902 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS1Q92902 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HPS1Q92902 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.5■□□□□ 0.39
HPS1Q92902 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.5■□□□□ 0.39
HPS1Q92902 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
HPS1Q92902 AL591742.1-201ENST00000604433 565 ntBASIC17.5■□□□□ 0.39
HPS1Q92902 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.5■□□□□ 0.39
HPS1Q92902 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.5■□□□□ 0.39
HPS1Q92902 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.5■□□□□ 0.39
HPS1Q92902 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
HPS1Q92902 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS1Q92902 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HPS1Q92902 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
HPS1Q92902 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS1Q92902 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HPS1Q92902 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.49■□□□□ 0.39
HPS1Q92902 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS1Q92902 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS1Q92902 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HPS1Q92902 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HPS1Q92902 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.49■□□□□ 0.39
HPS1Q92902 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS1Q92902 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.49■□□□□ 0.39
HPS1Q92902 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HPS1Q92902 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS1Q92902 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS1Q92902 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS1Q92902 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HPS1Q92902 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS1Q92902 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HPS1Q92902 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
HPS1Q92902 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.49■□□□□ 0.39
HPS1Q92902 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS1Q92902 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 AC011270.2-201ENST00000624293 2550 ntBASIC17.48■□□□□ 0.39
HPS1Q92902 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
HPS1Q92902 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS1Q92902 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HPS1Q92902 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS1Q92902 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS1Q92902 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.48■□□□□ 0.39
HPS1Q92902 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.48■□□□□ 0.39
HPS1Q92902 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.48■□□□□ 0.39
HPS1Q92902 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS1Q92902 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms