Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DDX1Q92499 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DDX1Q92499 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX1Q92499 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX1Q92499 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
DDX1Q92499 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX1Q92499 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.5■□□□□ 0.87
DDX1Q92499 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.5■□□□□ 0.87
DDX1Q92499 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.5■□□□□ 0.87
DDX1Q92499 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX1Q92499 RPS2P55-201ENST00000397318 883 ntBASIC20.5■□□□□ 0.87
DDX1Q92499 RCN1P1-201ENST00000400413 996 ntBASIC20.5■□□□□ 0.87
DDX1Q92499 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.5■□□□□ 0.87
DDX1Q92499 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.5■□□□□ 0.87
DDX1Q92499 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX1Q92499 AC107956.1-201ENST00000494359 873 ntBASIC20.5■□□□□ 0.87
DDX1Q92499 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.5■□□□□ 0.87
DDX1Q92499 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
DDX1Q92499 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX1Q92499 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.5■□□□□ 0.87
DDX1Q92499 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX1Q92499 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX1Q92499 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.5■□□□□ 0.87
DDX1Q92499 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX1Q92499 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.5■□□□□ 0.87
DDX1Q92499 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX1Q92499 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX1Q92499 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX1Q92499 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX1Q92499 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX1Q92499 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX1Q92499 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX1Q92499 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
DDX1Q92499 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX1Q92499 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX1Q92499 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX1Q92499 ARMC10P1-201ENST00000313754 855 ntBASIC20.49■□□□□ 0.87
DDX1Q92499 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.49■□□□□ 0.87
DDX1Q92499 AC087499.1-201ENST00000418141 1075 ntBASIC20.49■□□□□ 0.87
DDX1Q92499 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.49■□□□□ 0.87
DDX1Q92499 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
DDX1Q92499 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX1Q92499 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.49■□□□□ 0.87
DDX1Q92499 AC110285.5-201ENST00000611501 352 ntBASIC20.49■□□□□ 0.87
DDX1Q92499 AL135905.2-201ENST00000584934 1404 ntBASIC20.49■□□□□ 0.87
DDX1Q92499 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX1Q92499 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX1Q92499 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX1Q92499 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX1Q92499 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX1Q92499 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX1Q92499 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.48■□□□□ 0.87
DDX1Q92499 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX1Q92499 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX1Q92499 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
DDX1Q92499 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX1Q92499 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX1Q92499 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX1Q92499 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX1Q92499 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX1Q92499 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX1Q92499 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
DDX1Q92499 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.48■□□□□ 0.87
DDX1Q92499 AL590326.2-201ENST00000625139 305 ntBASIC20.48■□□□□ 0.87
DDX1Q92499 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX1Q92499 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
DDX1Q92499 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX1Q92499 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX1Q92499 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX1Q92499 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX1Q92499 FP475955.4-201ENST00000623131 1990 ntBASIC20.48■□□□□ 0.87
DDX1Q92499 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX1Q92499 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
DDX1Q92499 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
DDX1Q92499 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
DDX1Q92499 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX1Q92499 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX1Q92499 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX1Q92499 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX1Q92499 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX1Q92499 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX1Q92499 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
DDX1Q92499 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
DDX1Q92499 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
DDX1Q92499 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX1Q92499 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX1Q92499 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX1Q92499 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX1Q92499 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.47■□□□□ 0.87
DDX1Q92499 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.47■□□□□ 0.87
DDX1Q92499 IRX1P1-201ENST00000438849 1838 ntBASIC20.47■□□□□ 0.87
DDX1Q92499 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX1Q92499 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
DDX1Q92499 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX1Q92499 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX1Q92499 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX1Q92499 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX1Q92499 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
DDX1Q92499 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
DDX1Q92499 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms