Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 KRT18P68-201ENST00000392293 1000 ntBASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 AC123595.1-201ENST00000440769 1046 ntBASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 AC010536.3-201ENST00000620306 533 ntBASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 AC008764.6-201ENST00000595909 2069 ntBASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.09■□□□□ 0.65
CKAP2Q8WWK9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CKAP2Q8WWK9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 AC007322.4-201ENST00000509611 723 ntBASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.08■□□□□ 0.64
CKAP2Q8WWK9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 TFP1-202ENST00000475455 1573 ntBASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 KRT19P1-201ENST00000405746 1186 ntBASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CKAP2Q8WWK9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms