Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.84■□□□□ 0.29
RPS4Y2Q8TD47 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RPS4Y2Q8TD47 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPS4Y2Q8TD47 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS4Y2Q8TD47 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 AL390719.1-204ENST00000412397 1219 ntBASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4Y2Q8TD47 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 NOC2LP2-201ENST00000407594 1944 ntBASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 MIR663A-201ENST00000385250 93 ntBASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 ANO7L1-203ENST00000602586 1720 ntBASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.81■□□□□ 0.28
RPS4Y2Q8TD47 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RPS4Y2Q8TD47 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms