Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC89Q8N998 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC89Q8N998 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC89Q8N998 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC89Q8N998 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC89Q8N998 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 NCF1B-203ENST00000435988 1254 ntBASIC19.93■□□□□ 0.78
CCDC89Q8N998 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC89Q8N998 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC89Q8N998 HLA-B-256ENST00000639848 1089 ntBASIC19.93■□□□□ 0.78
CCDC89Q8N998 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC89Q8N998 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC89Q8N998 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC89Q8N998 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC89Q8N998 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC89Q8N998 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC89Q8N998 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC89Q8N998 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC89Q8N998 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC89Q8N998 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC89Q8N998 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC89Q8N998 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCDC89Q8N998 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CCDC89Q8N998 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC89Q8N998 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC89Q8N998 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC89Q8N998 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC89Q8N998 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC89Q8N998 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC89Q8N998 BCL2-203ENST00000589955 5011 ntBASIC19.91■□□□□ 0.78
CCDC89Q8N998 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 YBX1P10-201ENST00000444752 975 ntBASIC19.91■□□□□ 0.78
CCDC89Q8N998 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.91■□□□□ 0.78
CCDC89Q8N998 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC89Q8N998 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC89Q8N998 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC89Q8N998 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC89Q8N998 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC89Q8N998 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC89Q8N998 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC89Q8N998 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC89Q8N998 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC89Q8N998 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC89Q8N998 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC89Q8N998 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC89Q8N998 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC89Q8N998 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC89Q8N998 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC89Q8N998 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC89Q8N998 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC89Q8N998 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC89Q8N998 PNMA6B-201ENST00000538162 1200 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms