Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATPAF2Q8N5M1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATPAF2Q8N5M1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATPAF2Q8N5M1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATPAF2Q8N5M1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 RPS2P4-201ENST00000476944 856 ntBASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
ATPAF2Q8N5M1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 KRT16P1-201ENST00000399124 1418 ntBASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 AC073195.1-201ENST00000607241 877 ntBASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 AC131212.4-201ENST00000623606 975 ntBASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATPAF2Q8N5M1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 CR392000.1-201ENST00000624770 1228 ntBASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 AC141586.3-201ENST00000562166 1838 ntBASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 AC120498.9-201ENST00000339021 3867 ntBASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ATPAF2Q8N5M1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 AC004980.1-204ENST00000429707 299 ntBASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms