Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
C9orf40Q8IXQ3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
C9orf40Q8IXQ3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
C9orf40Q8IXQ3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.77■□□□□ 0.43
C9orf40Q8IXQ3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 TSPY23P-201ENST00000440136 739 ntBASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 SLC25A1P4-201ENST00000567977 778 ntBASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 TEX21P-204ENST00000641479 1693 ntBASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 AC096733.2-201ENST00000609937 1394 ntBASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 AL032819.2-201ENST00000624543 2162 ntBASIC17.76■□□□□ 0.43
C9orf40Q8IXQ3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 KRT8P9-201ENST00000558927 1449 ntBASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 MFAP1P1-201ENST00000442257 1255 ntBASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 AP005242.2-201ENST00000580065 1175 ntBASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 AC073912.3-201ENST00000624414 853 ntBASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 AC116562.4-201ENST00000641316 2276 ntBASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
C9orf40Q8IXQ3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 MMP23A-201ENST00000234610 1017 ntBASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 CRYGFP-201ENST00000418459 633 ntBASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 TSPY21P-201ENST00000433481 731 ntBASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.74■□□□□ 0.43
C9orf40Q8IXQ3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
C9orf40Q8IXQ3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms