Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 GCSHP2-201ENST00000560971 527 ntBASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 AC069148.1-201ENST00000608741 768 ntBASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NPAS3Q8IXF0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 HCG4P8-203ENST00000443049 980 ntBASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 MIR4674-201ENST00000582457 87 ntBASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 HYMAI.1-201ENST00000620949 238 ntBASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 AP005212.1-201ENST00000581547 1997 ntBASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS3Q8IXF0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NPAS3Q8IXF0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NPAS3Q8IXF0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
NPAS3Q8IXF0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 STARP1-201ENST00000397973 869 ntBASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 ZNF444P1-201ENST00000559497 298 ntBASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
NPAS3Q8IXF0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 AL391422.3-201ENST00000603791 2761 ntBASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms