Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 ECEL1P2-202ENST00000465689 757 ntBASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SCN4BQ8IWT1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 TSPY14P-201ENST00000303979 915 ntBASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 AC005521.1-201ENST00000393351 872 ntBASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 RN7SL850P-201ENST00000579959 291 ntBASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN4BQ8IWT1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 INGX-201ENST00000359239 846 ntBASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN4BQ8IWT1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
SCN4BQ8IWT1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCN4BQ8IWT1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.27■□□□□ 0.83
SCN4BQ8IWT1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCN4BQ8IWT1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 MIR1224-201ENST00000408193 85 ntBASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 TMPOP1-202ENST00000424642 1267 ntBASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 AL137013.1-201ENST00000432946 1228 ntBASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 KRT18P57-201ENST00000443599 1254 ntBASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 SLC25A3P1-201ENST00000443844 931 ntBASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 AC128688.1-201ENST00000487626 519 ntBASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN4BQ8IWT1 SDHAP1-207ENST00000440850 2000 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms