Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 AC006333.2-201ENST00000607957 2099 ntBASIC17.78■□□□□ 0.44
VRK2Q86Y07 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
VRK2Q86Y07 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 NBPF21P-201ENST00000425093 1451 ntBASIC17.77■□□□□ 0.44
VRK2Q86Y07 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
VRK2Q86Y07 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
VRK2Q86Y07 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
VRK2Q86Y07 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.77■□□□□ 0.44
VRK2Q86Y07 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.77■□□□□ 0.44
VRK2Q86Y07 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
VRK2Q86Y07 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.77■□□□□ 0.44
VRK2Q86Y07 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.77■□□□□ 0.44
VRK2Q86Y07 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
VRK2Q86Y07 AC233263.1-201ENST00000578059 224 ntBASIC17.77■□□□□ 0.44
VRK2Q86Y07 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.77■□□□□ 0.44
VRK2Q86Y07 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
VRK2Q86Y07 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VRK2Q86Y07 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VRK2Q86Y07 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VRK2Q86Y07 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.77■□□□□ 0.43
VRK2Q86Y07 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
VRK2Q86Y07 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
VRK2Q86Y07 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
VRK2Q86Y07 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 CROCCP3-202ENST00000420820 1947 ntBASIC17.76■□□□□ 0.43
VRK2Q86Y07 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VRK2Q86Y07 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.76■□□□□ 0.43
VRK2Q86Y07 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VRK2Q86Y07 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VRK2Q86Y07 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VRK2Q86Y07 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
VRK2Q86Y07 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VRK2Q86Y07 IRX1P1-201ENST00000438849 1838 ntBASIC17.75■□□□□ 0.43
VRK2Q86Y07 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
VRK2Q86Y07 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VRK2Q86Y07 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VRK2Q86Y07 KRT17P3-201ENST00000420566 1262 ntBASIC17.75■□□□□ 0.43
VRK2Q86Y07 AC026366.1-201ENST00000488803 879 ntBASIC17.75■□□□□ 0.43
VRK2Q86Y07 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.75■□□□□ 0.43
VRK2Q86Y07 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.75■□□□□ 0.43
VRK2Q86Y07 AC069544.1-201ENST00000609399 999 ntBASIC17.75■□□□□ 0.43
VRK2Q86Y07 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.75■□□□□ 0.43
VRK2Q86Y07 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VRK2Q86Y07 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
VRK2Q86Y07 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.75■□□□□ 0.43
VRK2Q86Y07 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VRK2Q86Y07 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.75■□□□□ 0.43
VRK2Q86Y07 FP475955.4-201ENST00000623131 1990 ntBASIC17.75■□□□□ 0.43
VRK2Q86Y07 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VRK2Q86Y07 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VRK2Q86Y07 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms